Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28]
678 sequences; 201,793,324 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq24 143 3e-29
seq668 125 8e-24
>seq24
Length=5879236
Score = 143 bits (158), Expect = 3e-29
Identities = 255/364 (70%), Gaps = 11/364 (3%)
Strand=Plus/Plus
Query 124487 CTCGATAAACTCACGGATGCTGTGCGTCTCACCCGTGCCAATCACGAAATCTTCGGGAAT 124546
||| | |||||| || | | |||||| || || ||| |||| ||||||||||| || |
Sbjct 3063178 CTCTACAAACTCCCGCACGGAGTGCGTTTCCCCGGTGGCAATAACGAAATCTTCTGGCTT 3063237
Query 124547 CGACTGCTGCAACATAAGCCACATGGCTTGGACGTAGTCCTCTGCGTGCCCCCAGTCGCG 124606
|||||||| ||| |||||||| |||| ||||||||| | ||||| |||||||| ||
Sbjct 3063238 GTCCTGCTGCATCATGAGCCACATCGCTTCGACGTAGTCTTTGGCGTGGCCCCAGTCACG 3063297
Query 124607 CTTGGCATCCAGGTTTCCGAGCTCGATTGGCT-TGGCCGTCTTGTTCCA---CTCCGCCA 124662
||||| ||| || || || ||||||| || || ||| | | | || ||||
Sbjct 3063298 CTTGGAATCAAGATTACCCAGCTCGAGGTACTCCTGCTGTC-CGAGCGATATCTTCGCC- 3063355
Query 124663 AACCCA--GTGTAATCTTGCGCGTCACAAACTCGGAACCGCGTCGCTCAGACTCGTGGTT 124720
||| | | || || ||||| || ||||| | || || ||| |||||||| ||
Sbjct 3063356 -ACCGAGCGGGTTATTTTGCGTGTGACAAAATTTTCTCCCCGGCGCGGTGACTCGTGATT 3063414
Query 124721 GAACAGAATGCCAGTACACGCAAACATCCCGTACGACTCGCGGTAGTTTTTCGTCATCCA 124780
|| ||||| ||| | || || ||||| |||||| ||||| |||||| || |||||
Sbjct 3063415 AAAGAGAATCCCATTGCAGGCGAACATATCGTACGCTTCGCGATAGTTTATCACAATCCA 3063474
Query 124781 ATACCCAAAGAGCTTGG-ACACGCCATAGGGGCTTCGGGGGTAGAATGGGGTGTTTTCAT 124839
|| || | | ||||| ||| | | || ||| || || ||||| || || || || |
Sbjct 3063475 GTAACCGTACATCTTGGCACA-GGCGTACGGGGAGCGTGGATAGAACGGTGTCTTCTCGT 3063533
Query 124840 TTTG 124843
| ||
Sbjct 3063534 TCTG 3063537
Score = 118 bits (130), Expect = 1e-21
Identities = 244/359 (68%), Gaps = 13/359 (4%)
Strand=Plus/Plus
Query 158943 AAACTCGCGGATGCTGTGCGTCTCTCCAGTCGCAATCACAAAGTCCTCTGGACCGGGCTG 159002
|||||| || | | |||||| || || || ||||| || || || ||||| | |||
Sbjct 3063184 AAACTCCCGCACGGAGTGCGTTTCCCCGGTGGCAATAACGAAATCTTCTGGCTTGTCCTG 3063243
Query 159003 TTGGAGCATGAGCCACATGGCCTCGACGTAATCCTGCGCGTGACCCCAGTCGCGCTTGGC 159062
|| | |||||||||||| || |||||||| || | ||||| |||||||| |||||||
Sbjct 3063244 CTGCATCATGAGCCACATCGCTTCGACGTAGTCTTTGGCGTGGCCCCAGTCACGCTTGGA 3063303
Query 159063 ATCCATGTTCCCGAGCTCGATG-ACT-----TTTCCAGACTTTTTCCACTCAGCCAGACC 159116
||| | || || ||||||| | ||| | ||| | | | || ||| |||
Sbjct 3063304 ATCAAGATTACCCAGCTCGAGGTACTCCTGCTGTCCGAGCGATAT---CTTCGCC--ACC 3063358
Query 159117 GAGC--GTGATCTTGCGCGTCACAAACTCTGCTCCGCGCCGTTCCGACTCATGGTTAAAC 159174
|||| || || ||||| || ||||| | | |||| || || ||||| || |||||
Sbjct 3063359 GAGCGGGTTATTTTGCGTGTGACAAAATTTTCTCCCCGGCGCGGTGACTCGTGATTAAAG 3063418
Query 159175 AGAATGCCGGTACAAGCGAACAGGTTATAGGACTCGCGGTAATTTTTAGTTATCCAGTAT 159234
||||| || | || ||||||| | || | ||||| || ||| | ||||||||
Sbjct 3063419 AGAATCCCATTGCAGGCGAACATATCGTACGCTTCGCGATAGTTTATCACAATCCAGTAA 3063478
Query 159235 CCAAAGAGCTTGGAGACGCCGTATGGACTCCGAGGATAAAATGGTGTCCCCTCATTTTG 159293
|| | | ||||| | |||| || || ||||| || |||||| ||| || ||
Sbjct 3063479 CCGTACATCTTGGCACAGGCGTACGGGGAGCGTGGATAGAACGGTGTCTTCTCGTTCTG 3063537
>seq668
Length=6225679
Score = 125 bits (138), Expect = 8e-24
Identities = 270/401 (67%), Gaps = 11/401 (3%)
Strand=Plus/Plus
Query 152742 CAGCTTCGGCCAGTACACGTGGAACATGTTGAGGACCAAGCCCTTGATGTGCGATCCGTC 152801
||||| |||||||| | || | | ||||| | ||| || |||||||||||||| ||
Sbjct 1120970 CAGCTCCGGCCAGTTCGTATGTATGAAGTTGATCAGCAAACCTTTGATGTGCGATCCATC 1121029
Query 152802 AAGATCCGCGTCGGTCATGATCATCAGACGACCGTAGCGCAGG----TCACGTAGTGACC 152857
||||| |||||||||||||||| ||||| || || ||| | ||
Sbjct 1121030 CTGATCCTGATCGGTCATGATCATCACCTTGCCGTACCGAAGCGTCTTCAAATCGTCCGT 1121089
Query 152858 CGTAG---ACCTTTCCATGT--TGAAGCCCGAGGATCTTTTTGAGGTTGGAAAATTCCTC 152912
|||| || | | | ||| || |||||||| ||||| | || ||| || ||| |
Sbjct 1121090 CGTAAGGTACTTCTTCTTGTACTGCAGCCCGAGAATCTTGATCAGATTGTTAATTTCGGC 1121149
Query 152913 ATTATCGGTCACCTGTTTCACCGTGGCATCCCGAACATTGCGCGGCTTTCCCCGGAGTGG 152972
||| || | ||| || || || ||||| ||||| || |||| || || | ||
Sbjct 1121150 ATTTTCCAAAATCTGCTTGTGTGTCGCTTCCCGCACATTCAGCAGCTTACCGCGCAACGG 1121209
Query 152973 AAACACGCCGAACGCGTTGCGGCCTACAACGCTCAGACCGGCAATAGCAAGGGCTTTCGC 153032
|||||||||| | | | ||| || || || | || |||| | ||| | | ||| ||
Sbjct 1121210 AAACACGCCGTAAGTATCGCGACCAACCACTCCCAACCCGGACACAGCCAACGTTTTGGC 1121269
Query 153033 CGAGTCACCCTCGGTGATAATAAGCGTACAGTCGTGAGACCGATGAGTACCGGCCCAGTT 153092
||| || |||||||||| ||| ||||| |||| | | || | | ||||| |||
Sbjct 1121270 CGAATCTCCCTCGGTGAGAATGAGCGTGCAGTTGAGCGAATTGCGCGACCCGGCATCGTT 1121329
Query 153093 GGCGTCGTCAAGCTTGGGGATTCCCGTGATCCTG--CTTTT 153131
||||| || ||||| ||||| ||| | ||| || |||||
Sbjct 1121330 AGCGTCCTCCAGCTTCGGGATACCCTTAATCTTGGACTTTT 1121370
Score = 109 bits (120), Expect = 6e-19
Identities = 294/447 (66%), Gaps = 12/447 (3%)
Strand=Plus/Plus
Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935
|| |||||||| || || || ||||||||||| | |||||| | || || || |
Sbjct 1120083 CCCGTACCGATTCCATCAGCCCCGTTGACCAGCAACATCGGAATGATCGGTAAATACCAG 1120142
Query 151936 TCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCGGA 151995
|||| || | | ||| || |||| | ||| | || | | || || |||
Sbjct 1120143 ACCGGTTCGATACGCTGATTATCGTCCAGCTGGTACTCCAGCAGCGGATCATCCAGCGGG 1120202
Query 151996 TCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGCCGCA 152055
| ||| || | || |||| | ||| ||||||||||| | | ||||| |
Sbjct 1120203 TGGAAAATACTACGCGTCAGTGCGGACAACATGGTGAAGATGTACCTAGGACTGGCGCTA 1120262
Query 152056 TCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGTTG 152115
||||| ||||| | ||| ||||| || ||||| ||| || | ||| || |||| |||
Sbjct 1120263 TCCTTTCCACCCGTCAGACGCGTACCGAACTGACCACCCGGATAGAGCAGATTGATGTTA 1120322
Query 152116 TTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGT-GCCCTGCAGACTCGCTTCACC 152174
||| || || | ||||| |||||||| || ||||| | | | || | ||||||
Sbjct 1120323 TTGCTTCCGACATAGTTCTGGGCCAAATTGACGATCGTCGAACAG-AGCGACTGTTCACC 1120381
Query 152175 GTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCC-- 152232
||| || || |||| || ||| || | |||| |||||||| || ||||| | |||
Sbjct 1120382 GTGATGGTAGGCCGACTTCTCTGCAACCGATCCGGCCAACTGGGCTACCTTAACCTCCCG 1120441
Query 152233 ---GTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAA 152289
|||||| | ||||| |||| | | | ||||| | ||| ||||||||
Sbjct 1120442 TTTATCGTCACG-----CTTGAAGCAGGTGAACAGAACCTTCCTTTGGCCCGGTTTCAAT 1120496
Query 152290 CCGTCCACCACGTGAGGAATCGAACGC 152316
|| |||| || | ||||||||||||
Sbjct 1120497 CCATCCAACATGCACGGAATCGAACGC 1120523
Score = 104 bits (114), Expect = 3e-17
Identities = 273/411 (66%), Gaps = 17/411 (4%)
Strand=Plus/Plus
Query 117977 AGCTGAGGCCAGTACACGTGGATCATGTTCAGCACGAGCCCCTTGATATGGGAACCGTCC 118036
|||| ||||||| | || || | ||| | || | || ||||| || || || |||
Sbjct 1120971 AGCTCCGGCCAGTTCGTATGTATGAAGTTGATCAGCAAACCTTTGATGTGCGATCCATCC 1121030
Query 118037 AGATCCGCATCGGTCATGATCATCAGGCGGCCGTACCGTAAA-TCTCTCA----GGGAGT 118091
||||| ||||||||||||||||| ||||||||| | ||| ||| | ||
Sbjct 1121031 TGATCCTGATCGGTCATGATCATCACCTTGCCGTACCGAAGCGTCT-TCAAATCGTCCGT 1121089
Query 118092 TATAA---ACCTTACCATGT--TGGAGCCCGAGGATCTTTTTAAGGTTGGAAAATTCCTC 118146
||| || | | ||| || |||||||| ||||| | || ||| || ||| |
Sbjct 1121090 CGTAAGGTACTTCTTCTTGTACTGCAGCCCGAGAATCTTGATCAGATTGTTAATTTCGGC 1121149
Query 118147 ATTTTCCGTCACCTGTTTTATGGTGGCGTCCCGAACGTTGCGCGGCTTACCCCGCAGTGG 118206
||||||| | ||| || || || ||||| || || || ||||||| |||| ||
Sbjct 1121150 ATTTTCCAAAATCTGCTTGTGTGTCGCTTCCCGCACATTCAGCAGCTTACCGCGCAACGG 1121209
Query 118207 AAACACGCCAAACTTGTCACGGCCCACAACGCTCAAGCCGGCAATAGCAAGGGCCTTCGC 118266
||||||||| | | || || || || || | ||| |||| | ||| | | || ||
Sbjct 1121210 AAACACGCCGTAAGTATCGCGACCAACCACTCCCAACCCGGACACAGCCAACGTTTTGGC 1121269
Query 118267 CGAGTCACCCTCGGTAATAATAAGAGTGCACTCG---GTGCTGCGATGAGTACCGGCCCA 118323
||| || |||||||| | ||| || ||||| | | | ||| | | |||||
Sbjct 1121270 CGAATCTCCCTCGGTGAGAATGAGCGTGCAGTTGAGCGAATTGC---GCGACCCGGCATC 1121326
Query 118324 ATTAGCATCATCCAGCTTCGGAACGCCCGTAATGCGCGACTTTTTGGACCC 118374
||||| || ||||||||||| | ||| |||| |||||||| || ||
Sbjct 1121327 GTTAGCGTCCTCCAGCTTCGGGATACCCTTAATCTTGGACTTTTTCGAACC 1121377
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547211362344400
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