Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq179 87.8 1e-12 >seq179 Length=1335352 Score = 87.8 bits (96), Expect = 1e-12 Identities = 153/223 (69%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 29941 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 30000 ||| || ||||| || || ||||| | || || | |||||||||||| |||||||| || Sbjct 1075980 TAGTCCAGTGACATGTGCGATCATATGGGTCAGCAAAGAGTAGCTGGCAATGTTAAAAGG 1075921 Query 30001 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCT 30060 || || | ||| | || |||||| ||| || | ||| || || || ||||| || | Sbjct 1075920 AACGCCCAACCCAACATCGGCCGACCGCTGATACATCTGGCAAGACAGTTCTCCATCACC 1075861 Query 30061 CACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGG 30120 || ||||||| || ||| || || ||||| |||||| | | || || Sbjct 1075860 AACAAAAAACTGTGCCAAACAGTGACAAGGCGGAAGGGCCATGTTGGGTATATCGGAAGG 1075801 Query 30121 GTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTC 30163 ||||| |||| || ||| || || | || | ||| |||||| Sbjct 1075800 ATTCCAAGCGCTCATGATAATTCGACGATCATGTGGATTGTTC 1075758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406307042606376