Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28]
678 sequences; 201,793,324 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq646 105 4e-18
seq1 82.4 5e-11
>seq646
Length=9740529
Score = 105 bits (116), Expect = 4e-18
Identities = 166/235 (71%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 34478 CGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG 34537
|||| || | || || | ||||| ||| || || |||||| |||||||| || || |
Sbjct 6802128 CGCCACCGCGCAGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGG 6802069
Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597
| ||||| || |||| || || || ||||||||||| || | |||||| || |||||||
Sbjct 6802068 ACAGTGTGCGACCGTCCTCCAGCTGCTTACCGGCAAAGATCAGACGCTGCTGATCCGGCG 6802009
Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCC 34656
| | |||||||| || |||| || | || || | || || || | |||
Sbjct 6802008 GGATGCCCTCCTTATCCTGGATC-TTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCG 6801950
Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGA 34711
|| || | ||| || |||||||| || | ||||| || || |||||||| ||||
Sbjct 6801949 ACCTCAAGGGTAATGGTTTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTTGA 6801895
Score = 93.3 bits (102), Expect = 3e-14
Identities = 152/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
|| |||| ||||| |||||| || ||||| |||||||| || || || || || ||
Sbjct 9473335 AGTCGCAGCACCAGATGGAGGGTAGATTCCTTCTGAATGTTGTAGTCCGACAGAGTGCGA 9473276
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || || || || ||||| || || | |||||| || ||||| || | ||| |||
Sbjct 9473275 CCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGGATTCCTTCC 9473216
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTT 34668
|| || ||||||| || | | || ||||| ||| || || | ||
Sbjct 9473215 TTATCCTGGATCTTTGCCTTCACATTTTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTG 9473156
Query 34669 ATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|| || || ||||| | ||||||||| ||||||||||||
Sbjct 9473155 ATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATG 9473117
>seq1
Length=31626230
Score = 82.4 bits (90), Expect = 5e-11
Identities = 153/222 (69%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | |||| ||| || || ||||| |||||||||||||| || || || ||
Sbjct 15287655 AGACGAAGGACCAGATGAAGGGTCGATTCCTTCTGAATGTTATAATCCGACAGAGTGCGG 15287596
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || || || || || || || || | |||||| || || || || | |||||||
Sbjct 15287595 CCATCCTCCAGCTGCTTGCCTGCGAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCC 15287536
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
||||| ||| || | |||||| | || || || |||||| || | |||
Sbjct 15287535 TTGTC-CTGAATCTTGGCCTTAACGTTCTCGATGGTATCGGAAGGCTCCACCTCAAGGGT 15287477
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709
||||| || || || | || || || || |||||||||||
Sbjct 15287476 GATCGTCTTTCCAGTCAGGGTCTTGACGAAGATCTGCATGTT 15287435
Score = 82.4 bits (90), Expect = 5e-11
Identities = 151/219 (69%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | ||||| || | || |||||| || ||||| || || || || || ||
Sbjct 27268646 AGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGT 27268587
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
||||||| || || |||||||| || || | |||||| || || || || | ||||||
Sbjct 27268586 CCGTCTTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCTGGAGGAATGCCCTCC 27268527
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
||||| |||| || | || ||| | || ||||| ||| || |||| ||
Sbjct 27268526 TTGTCCTGGATC-TTAGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGT 27268468
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || || || | ||| ||||| || ||||||||
Sbjct 27268467 GATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 27268429
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314726999349974
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |