Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28]
678 sequences; 201,793,324 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq112 154 1e-32
seq1 140 3e-28
seq646 127 2e-24
>seq112
Length=21277816
Score = 154 bits (170), Expect = 1e-32
Identities = 216/303 (71%), Gaps = 0/303 (0%)
Strand=Plus/Plus
Query 135461 ACGCATGACCCGTTGTGGAACGCGGCACAACGGCAGCTTAAGCGAGAAGGCAAAATGCAC 135520
||||| ||| |||||||| |||| || | |||| | || || ||||||||||||
Sbjct 19215529 ACGCACGACGATCTGTGGAACTCGGCCCAGCTGCAGATGGTGCAGGAGGGCAAAATGCAC 19215588
Query 135521 GGATTTATGCGCATGTATTGGGCAAAAAAGATATTGGAATGGTCTGCATCGCCTGCAGAG 135580
|| ||| |||| ||||| ||||| || |||||| |||| ||| | | | || | ||
Sbjct 19215589 GGCTTTCTGCGGATGTACTGGGCCAAGAAGATACTGGAGTGGACAAAAACACCCGACGAA 19215648
Query 135581 GCGCTACAACACGCAATATTTTTTAATGATTACTACAGTTTAGATGGACGCGATTCAAAT 135640
||||| | || || | | | || ||| ||||| | ||||| |||||| | ||
Sbjct 19215649 GCGCTCGAGATAGCGATCTATCTGAACGATCGGTACAGCCTGGATGGGCGCGATCCGAAC 19215708
Query 135641 GGCTACGTAGGTTGTATGTGGTCTATTTGCGGTGTACACGATCAAGGATGGAAGGAGCGC 135700
|| ||||| || || |||||||| || || |||||||||| |||||||||||||||
Sbjct 19215709 GGGTACGTCGGGTGCATGTGGTCGATCGCGGGCATACACGATCAGGGATGGAAGGAGCGC 19215768
Query 135701 AAAGTGTTTGGCAAGATTCGCTATATGAACTATGACGGTTGTACAAGAAAATTTAATGTA 135760
|| | || ||||| || | || ||||||||||| || || | | || ||||| ||
Sbjct 19215769 GAAATTTTCGGCAAAATCAGGTACATGAACTATGAGGGATGCAAGCGTAAGTTTAACGTC 19215828
Query 135761 AAT 135763
|||
Sbjct 19215829 AAT 19215831
>seq1
Length=31626230
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || ||||| |||||| | || || || || || || |||||
Sbjct 27268429 ATGCAGATCTTCGTGAAGACGCTGACTGGCAAGACCATCACGCTGGAGGTCGAGCCGTCG 27268488
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| |||| |||| || || || || || ||||| || ||||| || || |||||
Sbjct 27268489 GACACGATCGAGAACGTGAAGGCTAAGATCCAGGACAAGGAGGGCATTCCTCCAGATCAG 27268548
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | |||||| || || |||||||| | || | ||||| ||||||
Sbjct 27268549 CAGCGTCTGATCTTCGCCGGTAAGCAGCTGGAAGACGGACGCACTCTGTCCGACTACAAC 27268608
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || |||||||||||||| || ||||| | ||| |||| || ||
Sbjct 27268609 ATCCAGAAGGAGTCGACCTTGCACTTGGTCCTCCGTCTGCGCGGGGG 27268655
Score = 136 bits (150), Expect = 3e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || ||||| |||||| | || || || || || || |||||
Sbjct 27268201 ATGCAGATCTTCGTGAAGACGCTGACTGGCAAGACCATCACGCTGGAGGTCGAGCCGTCG 27268260
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| |||| |||| || || || || || ||||| || ||||| || || |||||
Sbjct 27268261 GACACGATCGAGAACGTGAAGGCTAAGATCCAGGACAAGGAGGGCATTCCTCCAGATCAG 27268320
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | |||||| || || ||||||| | || | ||||| ||||||
Sbjct 27268321 CAGCGTCTGATCTTCGCCGGTAAGCAGCTGGAAGATGGACGCACTCTGTCCGACTACAAC 27268380
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||||||||| || ||||| | ||| |||| || || ||
Sbjct 27268381 ATCCAGAAGGAGTCGACCTTGCACTTGGTCCTCCGTCTGCGTGGAGGTAT 27268430
>seq646
Length=9740529
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || ||||| || ||||||||| | || || ||||| || || || ||
Sbjct 9473117 CATGCAGATTTTCGTGAAAACGCTCACCGGCAAGACCATCACACTTGAGGTCGAGCCTTC 9473176
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| |||| || | || || ||| || || || || ||||| || || || |||||
Sbjct 9473177 GGACACGATCGAAAATGTGAAGGCAAAGATCCAGGATAAGGAAGGAATCCCCCCGGATCA 9473236
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||| | || | ||||||||| || |||| || || || | || || |||||
Sbjct 9473237 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTGTCGGACTACAA 9473296
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|||||| ||||| || ||| | ||| |||| |||| | || |||||
Sbjct 9473297 CATTCAGAAGGAATCTACCCTCCATCTGGTGCTGCGACTCCGTGGTGG 9473344
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| || || || || | ||||| ||||| || || || ||
Sbjct 6801900 ATGCAGATCTTCGTCAAAACCCTCACGGGTAAAACCATTACCCTTGAGGTCGAGCCCTCG 6801959
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| |||| |||| || || || || || || || || ||||| || || |||||
Sbjct 6801960 GATACGATCGAGAATGTGAAGGCGAAGATCCAGGATAAGGAGGGCATCCCGCCGGATCAG 6802019
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||||| || || |||| ||| || || | ||||| ||||||
Sbjct 6802020 CAGCGTCTGATCTTTGCCGGTAAGCAGCTGGAGGACGGTCGCACACTGTCCGACTACAAC 6802079
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
||||| |||||||||||| | ||| |||| | || |||| ||||||
Sbjct 6802080 ATTCAGAAGGAGTCGACCCTTCATCTGGTGCTTCGCCTGCGCGGTGGC 6802127
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434914714066560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |