Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1 168 2e-36 seq646 152 1e-31 >seq1 Length=31626230 Score = 168 bits (186), Expect = 2e-36 Identities = 167/216 (77%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || ||||| || || || || || ||||||||||||| || || | ||||| Sbjct 15287649 AGGACCAGATGAAGGGTCGATTCCTTCTGAATGTTATAATCCGACAGAGTGCGGCCATCC 15287590 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||||||||||||||| || || || || || || || | ||| ||||||||| Sbjct 15287589 TCCAGCTGCTTGCCTGCGAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTGTCC 15287530 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| |||||||| || || || ||||| || ||||||||| Sbjct 15287529 TGAATCTTGGCCTTAACGTTCTCGATGGTATCGGAAGGCTCCACCTCAAGGGTGATCGTC 15287470 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTA 211118 ||||| || || ||||| || || | |||||| ||| Sbjct 15287469 TTTCCAGTCAGGGTCTTGACGAAGATCTGCATGTTA 15287434 Score = 158 bits (174), Expect = 3e-33 Identities = 170/225 (76%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || ||| || | ||||| | ||| | || ||||| || |||||||| || || | || Sbjct 27268425 TCCACGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAG 27268366 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 || | |||||||||||||||||| || |||||||| || || || || || ||||||| Sbjct 27268365 AGTGCGTCCATCTTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCTGGAGGAAT 27268306 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 || ||||||||||||||||| |||||||| ||||| ||||| || || ||||| Sbjct 27268305 GCCCTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGACCTC 27268246 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| ||||| || || || ||||| || || | |||||| Sbjct 27268245 CAGCGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 27268201 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| | || ||||| || |||||||| || || | || || | ||| ||| Sbjct 27268640 AGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCT 27268581 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || |||||||| || || || || || ||||||| || ||||||||| Sbjct 27268580 TCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCC 27268521 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| ||||| ||||| || || ||||| || ||||| ||| Sbjct 27268520 TGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTC 27268461 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | |||||| Sbjct 27268460 TTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 27268429 >seq646 Length=9740529 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| |||| || || || || || || || || || || ||||| || |||| || || Sbjct 9473339 ACGGAGTCGCAGCACCAGATGGAGGGTAGATTCCTTCTGAATGTTGTAGTCCGACAGAGT 9473280 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| |||||||||||||| |||||||| || || || || || || || | ||| Sbjct 9473279 GCGACCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGGATTCC 9473220 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||| |||||||||||| ||||| |||||||| ||||| || || ||||| || Sbjct 9473219 TTCCTTATCCTGGATCTTTGCCTTCACATTTTCGATCGTGTCCGAAGGCTCGACCTCAAG 9473160 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || ||||| || || || || | |||||| Sbjct 9473159 TGTGATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCAT 9473118 Score = 118 bits (130), Expect = 2e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || ||||| || ||||| || || ||||| || || | || || | || || Sbjct 6802111 AGCACCAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGTGTGCGACCGTCC 6802052 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || || ||||| || || || || || || || | || ||||| ||| Sbjct 6802051 TCCAGCTGCTTACCGGCAAAGATCAGACGCTGCTGATCCGGCGGGATGCCCTCCTTATCC 6801992 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| || ||||| || || ||| || ||||| || || || || Sbjct 6801991 TGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTT 6801932 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || |||||||| || || || || | |||||| || Sbjct 6801931 TTACCCGTGAGGGTTTTGACGAAGATCTGCATCTT 6801897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159141930591470