Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28]
678 sequences; 201,793,324 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq1 168 2e-36
seq646 152 1e-31
>seq1
Length=31626230
Score = 168 bits (186), Expect = 2e-36
Identities = 167/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| || ||||| || || || || || ||||||||||||| || || | |||||
Sbjct 15287649 AGGACCAGATGAAGGGTCGATTCCTTCTGAATGTTATAATCCGACAGAGTGCGGCCATCC 15287590
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||||||||||||||||||||| || || || || || || || | ||| |||||||||
Sbjct 15287589 TCCAGCTGCTTGCCTGCGAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTGTCC 15287530
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || ||||| |||||||| || || || ||||| || |||||||||
Sbjct 15287529 TGAATCTTGGCCTTAACGTTCTCGATGGTATCGGAAGGCTCCACCTCAAGGGTGATCGTC 15287470
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTA 211118
||||| || || ||||| || || | |||||| |||
Sbjct 15287469 TTTCCAGTCAGGGTCTTGACGAAGATCTGCATGTTA 15287434
Score = 158 bits (174), Expect = 3e-33
Identities = 170/225 (76%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949
|| ||| || | ||||| | ||| | || ||||| || |||||||| || || | ||
Sbjct 27268425 TCCACGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAG 27268366
Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009
|| | |||||||||||||||||| || |||||||| || || || || || |||||||
Sbjct 27268365 AGTGCGTCCATCTTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCTGGAGGAAT 27268306
Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069
|| ||||||||||||||||| |||||||| ||||| ||||| || || |||||
Sbjct 27268305 GCCCTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGACCTC 27268246
Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| ||||| || || || ||||| || || | ||||||
Sbjct 27268245 CAGCGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 27268201
Score = 152 bits (168), Expect = 1e-31
Identities = 161/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| | ||| | || ||||| || |||||||| || || | || || | ||| |||
Sbjct 27268640 AGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCT 27268581
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||||||||| || |||||||| || || || || || ||||||| || |||||||||
Sbjct 27268580 TCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCC 27268521
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| |||||||| ||||| ||||| || || ||||| || ||||| |||
Sbjct 27268520 TGGATCTTAGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTC 27268461
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || ||||| || || | ||||||
Sbjct 27268460 TTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 27268429
>seq646
Length=9740529
Score = 152 bits (168), Expect = 1e-31
Identities = 167/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| |||| || || || || || || || || || || ||||| || |||| || ||
Sbjct 9473339 ACGGAGTCGCAGCACCAGATGGAGGGTAGATTCCTTCTGAATGTTGTAGTCCGACAGAGT 9473280
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||| |||||||||||||| |||||||| || || || || || || || | |||
Sbjct 9473279 GCGACCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGGATTCC 9473220
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||| |||||||||||| ||||| |||||||| ||||| || || ||||| ||
Sbjct 9473219 TTCCTTATCCTGGATCTTTGCCTTCACATTTTCGATCGTGTCCGAAGGCTCGACCTCAAG 9473160
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| || ||||| || || || || | ||||||
Sbjct 9473159 TGTGATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCAT 9473118
Score = 118 bits (130), Expect = 2e-21
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || || ||||| || ||||| || || ||||| || || | || || | || ||
Sbjct 6802111 AGCACCAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGTGTGCGACCGTCC 6802052
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||||||||| || || ||||| || || || || || || || | || ||||| |||
Sbjct 6802051 TCCAGCTGCTTACCGGCAAAGATCAGACGCTGCTGATCCGGCGGGATGCCCTCCTTATCC 6801992
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||||| || ||||| || || ||| || ||||| || || || ||
Sbjct 6801991 TGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTT 6801932
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| |||||||| || || || || | |||||| ||
Sbjct 6801931 TTACCCGTGAGGGTTTTGACGAAGATCTGCATCTT 6801897
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159141930591470
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |