Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq646 104 2e-17 >seq646 Length=9740529 Score = 104 bits (114), Expect = 2e-17 Identities = 145/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||| ||||| |||||||||||||| ||||| || || || || || || || Sbjct 6801897 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAAACCATTACCCTTGAGGTCGAGCCC 6801956 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 |||| || | || ||| | || | || || || || || || | ||||| || Sbjct 6801957 TCGGATACGATCGAGAATGTGAAGGC-GAAGATCCAGGATAAGGAGGGCATCCCGCCGGA 6802015 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 ||| |||||| | || |||||||| || || ||||| |||| ||||| | ||| || Sbjct 6802016 TCAGCAGCGTCTGATCTTTGCCGGTAAGCAGCTGGAGGACGGTCGCACACTGTCCGACTA 6802075 Query 23787 CAACATACAAAAAGAGTCCAC 23807 |||||| || || ||||| || Sbjct 6802076 CAACATTCAGAAGGAGTCGAC 6802096 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| ||||| ||||| || || || ||||| || || || || | || Sbjct 9473118 ATGCAGATTTTCGTGAAAACGCTCACCGGCAAGACCATCACACTTGAGGTCGAGCCTTCG 9473177 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | |||| | || ||| || || || ||||| | || || ||||| Sbjct 9473178 GACACGATCGAAAATGTGAAGGCAAAGATCCAGGATAAGGAAGGAATCCCCCCGGATCAG 9473237 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || |||||||| || ||||| || | |||||| | || |||||| Sbjct 9473238 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTGTCGGACTACAAC 9473297 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || || || || Sbjct 9473298 ATTCAGAAGGAATCTAC 9473314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338006806984424