Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28]
678 sequences; 201,793,324 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq112 111 1e-19
>seq112
Length=21277816
Score = 111 bits (122), Expect = 1e-19
Identities = 281/422 (67%), Gaps = 8/422 (2%)
Strand=Plus/Plus
Query 4374 AGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATT 4433
||||| || || || || || || || ||||| ||| ||||||||||| || || |
Sbjct 19493134 AGCAAACGATCGGCCACGAACTCAATGTACTGCGACATCAGTTCGCAGTTCATACCGAGC 19493193
Query 4434 AATCTC-ACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGAT 4492
| | || || || || || | |||||||| ||||| || || || || || |||
Sbjct 19493194 A-TATCGACCGGCAGGGCCTTCGTCAAAAATTCTTGCTCGATCACAACCGCATCACGGAT 19493252
Query 4493 TATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGC 4552
|| || | | || || || ||||| | || | || |||| | || ||
Sbjct 19493253 GATGTCCGTCACCCGCTCCTTGGAAGGTTTCTGCACCAGATACTTGAACATCAGGCAGGC 19493312
Query 4553 AAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGG 4612
||| ||||| |||| |||||||| | |||||| ||||| || || || | ||| ||
Sbjct 19493313 AAAGTCACAGTGCAGTCCTTCGTCGCGTGAAATCAGCTCGTTCGAGAAGGTCAGTCCCGG 19493372
Query 4613 CATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCC 4672
||| | |||| ||| || ||||| || || |||||||| || ||||| || ||
Sbjct 19493373 CATAAGGCCTCGCTTCTTTAGCCAGAAAATGGCGGCAAAGCTACCGCTGAAGAAGATTCC 19493432
Query 4673 TTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGT--CTTTA-AT 4729
||| || || ||||||||||| | || || | || | || || | || | ||
Sbjct 19493433 TTCGACAGCCGCAAACGCTACGACACGTTCGCCAA---AGTTTGCCTTCTTGCTCGAGAT 19493489
Query 4730 CCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAA 4789
||| || | |||||||| || || ||||| |||||||| | || | || || || ||
Sbjct 19493490 CCAGTTCAGTGCCCAGTCTGCCTTCTTCTTCACGCACGGCAACGTTTCAATGGCATTGAA 19493549
Query 4790 TA 4791
||
Sbjct 19493550 TA 19493551
Score = 82.4 bits (90), Expect = 7e-11
Identities = 174/260 (67%), Gaps = 0/260 (0%)
Strand=Plus/Plus
Query 4821 TAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAAT 4880
|| ||||| ||||| || ||||| || || | |||||| || || || |||||
Sbjct 19493668 TACGTGTCGATTAGCAGTGAGTACATCTCGCTGTGCACATTTTCCATCGCTATTTGAAAC 19493727
Query 4881 CCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTT 4940
||||||||||| | || || ||||| || || || | | || | || || | ||||
Sbjct 19493728 CCGTAAAAGCAGCGTGCCTCCGTTACCTGTACCTCCTGGCTGAAGCGCTCCACCAGGTTT 19493787
Query 4941 TCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGT 5000
||||| || ||||| || || ||||| || || | || || || || || | ||
Sbjct 19493788 TCGTTAACGATACCATCGGATGCGGCAAAGAAGGCAAGCACGTGCGAGATGAAATGACGT 19493847
Query 5001 TCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACA 5060
||| || || || || ||| | || || || | | ||| || ||||| ||
Sbjct 19493848 TCGCTCGGTTTCAGCGATTCCCAATCCTTCATGTCCTTGGAGAGATCGACCTCTTCCACG 19493907
Query 5061 GTCCAAAACGACGCTTCCGC 5080
|||||||| || ||||||||
Sbjct 19493908 GTCCAAAAGGAAGCTTCCGC 19493927
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427046071235774
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |