Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq112 111 1e-19 >seq112 Length=21277816 Score = 111 bits (122), Expect = 1e-19 Identities = 281/422 (67%), Gaps = 8/422 (2%) Strand=Plus/Plus Query 4374 AGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATT 4433 ||||| || || || || || || || ||||| ||| ||||||||||| || || | Sbjct 19493134 AGCAAACGATCGGCCACGAACTCAATGTACTGCGACATCAGTTCGCAGTTCATACCGAGC 19493193 Query 4434 AATCTC-ACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGAT 4492 | | || || || || || | |||||||| ||||| || || || || || ||| Sbjct 19493194 A-TATCGACCGGCAGGGCCTTCGTCAAAAATTCTTGCTCGATCACAACCGCATCACGGAT 19493252 Query 4493 TATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGC 4552 || || | | || || || ||||| | || | || |||| | || || Sbjct 19493253 GATGTCCGTCACCCGCTCCTTGGAAGGTTTCTGCACCAGATACTTGAACATCAGGCAGGC 19493312 Query 4553 AAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGG 4612 ||| ||||| |||| |||||||| | |||||| ||||| || || || | ||| || Sbjct 19493313 AAAGTCACAGTGCAGTCCTTCGTCGCGTGAAATCAGCTCGTTCGAGAAGGTCAGTCCCGG 19493372 Query 4613 CATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCC 4672 ||| | |||| ||| || ||||| || || |||||||| || ||||| || || Sbjct 19493373 CATAAGGCCTCGCTTCTTTAGCCAGAAAATGGCGGCAAAGCTACCGCTGAAGAAGATTCC 19493432 Query 4673 TTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGT--CTTTA-AT 4729 ||| || || ||||||||||| | || || | || | || || | || | || Sbjct 19493433 TTCGACAGCCGCAAACGCTACGACACGTTCGCCAA---AGTTTGCCTTCTTGCTCGAGAT 19493489 Query 4730 CCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAA 4789 ||| || | |||||||| || || ||||| |||||||| | || | || || || || Sbjct 19493490 CCAGTTCAGTGCCCAGTCTGCCTTCTTCTTCACGCACGGCAACGTTTCAATGGCATTGAA 19493549 Query 4790 TA 4791 || Sbjct 19493550 TA 19493551 Score = 82.4 bits (90), Expect = 7e-11 Identities = 174/260 (67%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 4821 TAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAAT 4880 || ||||| ||||| || ||||| || || | |||||| || || || ||||| Sbjct 19493668 TACGTGTCGATTAGCAGTGAGTACATCTCGCTGTGCACATTTTCCATCGCTATTTGAAAC 19493727 Query 4881 CCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTT 4940 ||||||||||| | || || ||||| || || || | | || | || || | |||| Sbjct 19493728 CCGTAAAAGCAGCGTGCCTCCGTTACCTGTACCTCCTGGCTGAAGCGCTCCACCAGGTTT 19493787 Query 4941 TCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGT 5000 ||||| || ||||| || || ||||| || || | || || || || || | || Sbjct 19493788 TCGTTAACGATACCATCGGATGCGGCAAAGAAGGCAAGCACGTGCGAGATGAAATGACGT 19493847 Query 5001 TCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACA 5060 ||| || || || || ||| | || || || | | ||| || ||||| || Sbjct 19493848 TCGCTCGGTTTCAGCGATTCCCAATCCTTCATGTCCTTGGAGAGATCGACCTCTTCCACG 19493907 Query 5061 GTCCAAAACGACGCTTCCGC 5080 |||||||| || |||||||| Sbjct 19493908 GTCCAAAAGGAAGCTTCCGC 19493927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427046071235774