Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28]
678 sequences; 201,793,324 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq1 147 2e-30
seq646 145 5e-30
>seq1
Length=31626230
Score = 147 bits (162), Expect = 2e-30
Identities = 172/230 (75%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 44109 TTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG 44168
||||||| | ||| | | |||| ||| | || |||||| ||||||||||| ||||
Sbjct 27268657 TTCCCCCGCGCAGACGGAGGACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGG 27268598
Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
|| ||| |||| ||||||||||| ||||| ||||||| |||||||||||||| ||
Sbjct 27268597 ACAGAGTGCGTCCGTCTTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCTGGAG 27268538
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCC 44287
| | || ||||| ||| ||||| ||||| |||| | || ||||| | | ||
Sbjct 27268537 GAATGCCCTCCTTGTCCTGGATCTTAGCCTTCAC-GTTCTCGATCGTGTCCGACGGCTCG 27268479
Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||| ||| || ||||| || || || |||||||||||||| |||||
Sbjct 27268478 ACCTCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCAT 27268429
Score = 138 bits (152), Expect = 8e-28
Identities = 148/193 (77%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205
|||||| ||||||||||| |||| || ||| | || ||||||||||| ||||| ||
Sbjct 27268392 CTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCTTCCAGCTGCTTACCGGCGAA 27268333
Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265
||||| |||||||||||||| ||| | || ||||| ||| ||||| ||||| ||
Sbjct 27268332 GATCAGACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTCAC-GT 27268274
Query 44266 TC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324
|| | || ||||| | | || ||||||| ||| || ||||| || || || |||||||
Sbjct 27268273 TCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCTTGCCAGTCAGCGTCTTCA 27268214
Query 44325 CGAAGATTTGCAT 44337
||||||| |||||
Sbjct 27268213 CGAAGATCTGCAT 27268201
Score = 134 bits (148), Expect = 1e-26
Identities = 158/211 (75%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
||||| ||||| || ||||| || ||||| ||||| | || ||| | || |||
Sbjct 15287646 ACCAGATGAAGGGTCGATTCCTTCTGAATGTTATAATCCGACAGAGTGCGGCCATCCTCC 15287587
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || || ||||||| |||||||||||||| || | || ||||| |||
Sbjct 15287586 AGCTGCTTGCCTGCGAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTGTCCTGA 15287527
Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| || |||| | ||||| |||| | |||||||| | || ||||||||
Sbjct 15287526 ATCTTGGCCTT-AACGTTCTCGATGGTATCGGAAGGCTCCACCTCAAGGGTGATCGTCTT 15287468
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||| || |||||||| |||||||| ||||||
Sbjct 15287467 TCCAGTCAGGGTCTTGACGAAGATCTGCATG 15287437
>seq646
Length=9740529
Score = 145 bits (160), Expect = 5e-30
Identities = 158/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
|||||| ||||| || |||||| || |||||||| |||| ||| ||| |||| ||
Sbjct 6802109 CACCAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGTGTGCGACCGTCCTC 6802050
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
||||||||| ||||||||||||| |||||||||||| | || | || ||||| |||
Sbjct 6802049 CAGCTGCTTACCGGCAAAGATCAGACGCTGCTGATCCGGCGGGATGCCCTCCTTATCCTG 6801990
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
|||||| ||||| | | || || || | || || ||||| | ||||| || ||
Sbjct 6801989 GATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTTTT 6801930
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||||||| || |||||||| |||||
Sbjct 6801929 ACCCGTGAGGGTTTTGACGAAGATCTGCAT 6801900
Score = 120 bits (132), Expect = 2e-22
Identities = 159/221 (72%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
|||| || |||||| || || || ||||| || |||||||| || | || |||
Sbjct 9473335 AGTCGCAGCACCAGATGGAGGGTAGATTCCTTCTGAATGTTGTAGTCCGACAGAGTGCGA 9473276
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| || ||||||||||| ||||| ||||| | |||||||||||| | || | ||||||
Sbjct 9473275 CCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGGATTCCTTCC 9473216
Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299
|| ||| ||||| ||||| || | || ||||| | | || ||||| | ||
Sbjct 9473215 TTATCCTGGATCTTTGCCTTCACATTTTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTG 9473156
Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340
|| ||||| || ||||| || |||||||| || ||||||||
Sbjct 9473155 ATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATGAT 9473115
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359987425354326
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |