Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28]
678 sequences; 201,793,324 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq1 161 2e-34
seq646 156 1e-32
>seq1
Length=31626230
Score = 161 bits (178), Expect = 2e-34
Identities = 167/218 (77%), Gaps = 3/218 (1%)
Strand=Plus/Plus
Query 177912 GTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTG 177971
||||| |||| | || ||||| || || || || ||||| ||||||||||| ||||||
Sbjct 15287432 GTTAACATGC---AGATCTTCGTCAAGACCCTGACTGGAAAGACGATCACCCTTGAGGTG 15287488
Query 177972 GAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCT 178031
|| || || |||||||||||||| || |||||||||||||| || ||||||||
Sbjct 15287489 GAGCCTTCCGATACCATCGAGAACGTTAAGGCCAAGATTCAGGACAAGGAGGGAATCCCA 15287548
Query 178032 CCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCC 178091
|| || ||||| || || |||||||| || || ||||| || ||||| | ||||| |
Sbjct 15287549 CCAGATCAGCAGCGTCTGATCTTCGCAGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCG 15287608
Query 178092 GATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
||||||||| | || || ||||| || || ||||| ||
Sbjct 15287609 GATTATAACATTCAGAAGGAATCGACCCTTCATCTGGT 15287646
Score = 141 bits (156), Expect = 2e-28
Identities = 155/205 (76%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || || || || || || ||||| || ||||| || || |||
Sbjct 27268204 CAGATCTTCGTGAAGACGCTGACTGGCAAGACCATCACGCTGGAGGTCGAGCCGTCGGAC 27268263
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||||||||| || ||||| |||||||| || || || ||||| || |||||
Sbjct 27268264 ACGATCGAGAACGTGAAGGCTAAGATCCAGGACAAGGAGGGCATTCCTCCAGATCAGCAG 27268323
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || ||||| ||||||||| | ||||| |||| || ||| ||
Sbjct 27268324 CGTCTGATCTTCGCCGGTAAGCAGCTGGAAGATGGACGCACTCTGTCCGACTACAACATC 27268383
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || |||| ||||
Sbjct 27268384 CAGAAGGAGTCGACCTTGCA-CTTG 27268407
Score = 136 bits (150), Expect = 1e-26
Identities = 154/205 (75%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || || || || || || ||||| || ||||| || || |||
Sbjct 27268432 CAGATCTTCGTGAAGACGCTGACTGGCAAGACCATCACGCTGGAGGTCGAGCCGTCGGAC 27268491
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||||||||| || ||||| |||||||| || || || ||||| || |||||
Sbjct 27268492 ACGATCGAGAACGTGAAGGCTAAGATCCAGGACAAGGAGGGCATTCCTCCAGATCAGCAG 27268551
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || ||||| ||||| ||| | ||||| |||| || ||| ||
Sbjct 27268552 CGTCTGATCTTCGCCGGTAAGCAGCTGGAAGACGGACGCACTCTGTCCGACTACAACATC 27268611
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || |||| ||||
Sbjct 27268612 CAGAAGGAGTCGACCTTGCA-CTTG 27268635
>seq646
Length=9740529
Score = 156 bits (172), Expect = 1e-32
Identities = 164/216 (76%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||||||||| ||||| || || || ||||| || ||||| || || |||
Sbjct 9473121 CAGATTTTCGTGAAAACGCTCACCGGCAAGACCATCACACTTGAGGTCGAGCCTTCGGAC 9473180
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || || |||||| ||||| || ||||||||||| ||||| |||||
Sbjct 9473181 ACGATCGAAAATGTGAAGGCAAAGATCCAGGATAAGGAAGGAATCCCCCCGGATCAGCAG 9473240
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || ||||| || ||||| | ||||| | || || ||| |
Sbjct 9473241 CGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTGTCGGACTACAACATT 9473300
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139
|| || ||||| || || ||||| || || |||||
Sbjct 9473301 CAGAAGGAATCTACCCTCCATCTGGTGCTGCGACTC 9473336
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203720743337532
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |