Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq2949 105 7e-18 seq38620 91.5 2e-13 >seq2949 Length=10021 Score = 105 bits (116), Expect = 7e-18 Identities = 195/278 (70%), Gaps = 6/278 (2%) Strand=Plus/Plus Query 119777 TCGAATTTCATATATCGTATCTTTCCGAACACGGTACGTTCCTTCCACGCTCTG-TCGTG 119835 ||| | ||||| ||||| |||||||| || | || || ||||| || ||| || || Sbjct 8959 TCGTAGTTCATGTATCGAATCTTTCCAAATATATCGCGCTCTTTCCA-GCCCTGATCATG 9017 Query 119836 GAGCCCCGCTACGGCCCATAGGCATCCCACGTATCCGTTGGGATCCGTTCCATCTA-ACT 119894 || ||||| | | ||| | || || ||||| ||||| ||||| |||||| | ||| Sbjct 9018 GATACCCGCGATCGACCACATACAGCCAACGTACCCGTTTGGATCGCGTCCATCGAGACT 9077 Query 119895 CGTATTTATCGTTTAAGTAGATA-CAGACGCTTAACGCACTTTCAGGAGTCTCGCTCCAT 119953 ||| ||||| | ||||| | || | | ||| |||||| || | | ||||| Sbjct 9078 -GTACCGGTCGTTCAGATAGATGGCTGATTCG-AGCGCCTCTTCAGGCGTTTTGGTCCAT 9135 Query 119954 TCCAGTAtttttttAGCCCAGTACATACGTAAGTATCCATGCATTTTACCTTCACGAACC 120013 || || ||||| || ||||||||||| || | | | || |||||||| ||||| ||| Sbjct 9136 TCGAGGATTTTCTTCGCCCAGTACATTCGCAGGAAGCCGTGCATTTTGCCTTCCTTTACC 9195 Query 120014 ATTTGAAGTTGTGCGGCGTTCCATAAGGGATCGTGTGT 120051 || || || || || | |||||| ||| |||||||| Sbjct 9196 ATCTGTAGCTGAGCCGAGTTCCACAAGTCGTCGTGTGT 9233 >seq38620 Length=1898 Score = 91.5 bits (100), Expect = 2e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 |||||||||||||| || || ||||||||| ||| | ||| ||||| || | ||| Sbjct 385 ATATACGTATCGATCAGCAGTGAGTACATTTCACTGTGGACGTTTTCCATCGCGACCTGG 444 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| ||||| |||||||||| | || || ||| | ||| || ||| | || Sbjct 445 AAACCGTAGAAGCAGCGGGCTTCCGTAACCTGCACCTCCTGGCTGAACCGCTCCACCAGG 504 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 || ||||| |||||||| || ||||| || || || Sbjct 505 TTCTCGTTTACGATGCCATCCGAAGCGGCAAAGAATGC 542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517215354152640