Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22]
51,048 sequences; 98,320,046 total letters
Query= NC_001623.1
Length=133894
Score E
Sequences producing significant alignments: (Bits) Value
seq20012 102 7e-17
seq50967 96.9 3e-15
>seq20012
Length=3655
Score = 102 bits (112), Expect = 7e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 28958 AAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACC 29017
||| ||||| || ||| ||||||| | || || || ||||| || ||| || ||
Sbjct 2716 AAAGATGCAGATTTTCGTCAAAACGCTCACTGGGAAGACCATAACTCTCGAGGTCGAGCC 2657
Query 29018 CGCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGA 29077
| | || || | | || | ||| ||| || |||||||||||| | || |||
Sbjct 2656 CTCTGACACCATCGAAAATGTGAAGGCAAAGATCCAGGATAAAGAAGGTATTCCACCAGA 2597
Query 29078 TCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTA 29137
||| || | || ||||| || |||||||| ||||| ||| || || | || ||
Sbjct 2596 TCAGCAGCGTCTGATCTTCGCCGGCAAACAGCTGGAGGATGGTCGTACGTTGTCTGACTA 2537
Query 29138 CAATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
|||||||||||||||||||| |||||| ||||||| ||| | || || ||
Sbjct 2536 TAATATTCAGAAGGAATCTACCCTTCACCTGGTGTTGCGACTTCGTGGTGG 2486
>seq50967
Length=297
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 28971 TTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCAGAGACGGTG 29030
||| ||||||| |||| |||||||| || || ||| ||| || | || ||| |
Sbjct 297 TTCGTCAAAACTCTGACCGGCAAAACGATCACTCTCGAGGTGGAGCCATCCGATACGATC 238
Query 29031 GCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTT 29090
| | | ||| ||| ||| ||||||||||| | || ||||||||| | |||
Sbjct 237 GAGAACGTCAAGGCAAAGATTCAGGATAAAGAAGGAATCCCGCCAGATCAACAGCGTCTT 178
Query 29091 ATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAGAAG 29150
||||| || || || || ||||||||| || || | |||||||| || |||||
Sbjct 177 ATCTTCGCCGGAAAGCAGCTGGAAGATGGTCGCACCTTGTCGGATTACAACATCCAGAAA 118
Query 29151 GAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
||||| ||||| || ||||||| || | ||||||||
Sbjct 117 GAATCGACTCTGCATTTGGTGTTGCGTCTGCGAGGAGG 80
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428069511828440
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |