Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq2949 132 9e-26 >seq2949 Length=10021 Score = 132 bits (146), Expect = 9e-26 Identities = 194/264 (73%), Gaps = 8/264 (3%) Strand=Plus/Minus Query 189452 TGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGAATG 189511 |||||| || | || | |||||||| | ||||| |||||||| | || | |||||| Sbjct 9218 TGGAACTCGGCTCAGCTACAGATGGTAAAGGAAGGCAAAATGCACGGCTTCCTGCGAATG 9159 Query 189512 TATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGACGCTTT-GAGTTATAG 189570 || ||||| ||||| || || |||||||| | ||| |||||||| || | || | | Sbjct 9158 TACTGGGCGAAGAAAATCCTCGAATGGACCAAAACGCCTGAAGAGGCGCTCGAATCAGCC 9099 Query 189571 TATCTATTTGAACAACAAGTACGAACTAGACGGCACG-GATCCTAACGGATACGTAGGTT 189629 |||||| ||||| || |||| || || || ||| ||||| ||||| ||||| || | Sbjct 9098 -ATCTATCTGAACGACCGGTACAGTCTCGATGG-ACGCGATCCAAACGGGTACGTTGGCT 9041 Query 189630 GTATGTGGTCTATTTGCGGAT-TACACGAT-AGAGCGTGGAAAGAAAGACCGATATTTGG 189687 |||||||||| || |||| | | || ||| || || |||||||| | |||||||| Sbjct 9040 GTATGTGGTCGATC-GCGGGTATCCATGATCAGGGC-TGGAAAGAGCGCGATATATTTGG 8983 Query 189688 AAAGATAAGATATATGAATTATGA 189711 |||||| |||| ||||| || || Sbjct 8982 AAAGATTCGATACATGAACTACGA 8959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 922607708121920