Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq42053 116 3e-21 seq20890 96.9 3e-15 >seq42053 Length=1259 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||||| || |||||||||||||||||||||| ||| ||| |||| || Sbjct 1217 ACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCA 1158 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || ||||| ||||| ||||| || || || || | || ||||||||| Sbjct 1157 AGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGG 1098 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || || || | | | | ||| | ||| ||||||| || || |||||| Sbjct 1097 ATCTTAGCTTTCACATTCTCGATAGTATCCGAAGGCTCGACCTCCAGAGTGATGGTCTTG 1038 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||||||||||||| ||||| ||||| Sbjct 1037 CCAGTCAGAGTCTTCACGAAGATCTGCAT 1009 >seq20890 Length=2679 Score = 96.9 bits (106), Expect = 3e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 |||||||||||||||||| || ||| ||| |||| ||||| || || |||||||| Sbjct 1445 CTCCTTCTGAATGTTGTAATCAGACAGCGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAA 1504 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 |||| ||||| || || || || | ||||||||||||| || || || || Sbjct 1505 AATCAGACGCTGCTGATCTGGGGGGATACCCTCCTTGTCCTGGATCTTGGCTTTCACATT 1564 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | | ||| || ||||| | |||||| ||||| ||||| || || ||||| Sbjct 1565 CTCGATCGTATCCGAGGGTTCAACCTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTCAC 1624 Query 45325 AAAGATTTGCATGTTG 45340 ||||| ||||| ||| Sbjct 1625 GAAGATCTGCATCTTG 1640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394829404952008