Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq38620 98.7 2e-15 >seq38620 Length=1898 Score = 98.7 bits (108), Expect = 2e-15 Identities = 157/225 (70%), Gaps = 3/225 (1%) Strand=Plus/Minus Query 101855 AAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACG---ATTTGGCGGAA 101911 || ||||||| | |||||| | || ||||| |||||| || | | || | ||| Sbjct 249 AAAAAGAAGGCCGATTGGGCTCTGAACTGGATCTCAAGCAAGAAGGCCAACTTTGGTGAA 190 Query 101912 CTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATT 101971 | |||||||||| ||||| || || || ||||| || || ||| || || ||||| Sbjct 189 CGGGTTGTTGCCTTCGCTGCCGTGGAGGGTATCTTTTTCAGCGGTAGTTTTGCGGCCATT 130 Query 101972 TTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCT 102031 |||||| | ||||| | || | |||| || ||||| | ||| || ||| | || || Sbjct 129 TTCTGGCTTAAGAAGCGCGGCTTGATGCCAGGACTCACGTTCTCGAACGAGCTGATCTCG 70 Query 102032 AGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAA 102076 | |||||||| || || |||||||||| || | |||| ||| Sbjct 69 CGCGACGAAGGACTGCACTGCGACTTTGCCTGTCTCATGTTCAAA 25 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 988936760110840