Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq1636 471 5e-128 seq38620 131 2e-25 >seq1636 Length=7642 Score = 471 bits (522), Expect = 5e-128 Identities = 1248/1888 (66%), Gaps = 40/1888 (2%) Strand=Plus/Minus Query 62037 TTGTCCAATGTGAATTGAATGGGAGCGGAT---GCGGGTTTCGTACGTAGATAGTACATT 62093 ||||||| ||||| ||||||| || | || || || ||||| | |||||||| Sbjct 5995 TTGTCCACCGTGAACTGAATGG---CGTTTACCGCCGGCTTGGTACGCAAGTAGTACATG 5939 Query 62094 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 62153 |||||||| || || | |||| ||||| ||||| || || || ||| |||| || Sbjct 5938 CCCGTTTTAAGGCCCATCTTCCAGCCGTAGAAATGGATCGATGTCAGCTTGCCATAATTC 5879 Query 62154 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 62213 || || || | || || || | || || |||||| || || ||||| | ||| || Sbjct 5878 GGTTCAGCCACGTGAATGTTGAACGACTGTGATTGATCTATAAACGCTCCTCGGTCGGCG 5819 Query 62214 GCCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAAC-TCGCTTAAT 62272 ||||| || ||| || ||| || || ||||| | ||||| |||| || | ||| Sbjct 5818 GCCATCTTGATGGAAGTTTTTACTGATATCTCCCAGACCGTTTTGTAAATGTCACG-AAT 5760 Query 62273 ATCTTCTGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTACCATAATCCTATTCTT 62329 |||| |||| | ||| ||||| || ||||| | ||| ||| | | | Sbjct 5759 CTCTTGGGGAATTTCCGTAATTTTCTGGATCGATCCGTTGTGCGCCAGAATTCGGTGTCT 5700 Query 62330 GATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTAC 62389 || ||||| | ||| || | ||| || || | | |||||||| | || || || Sbjct 5699 CATATCATCGTCCCACAAGCCACACTCCGTCAAGTCCTTCAGGAGATGGTGATTCACCAC 5640 Query 62390 TTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGA 62449 ||| |||||||| |||| || | || | | |||| || || |||||||| | || Sbjct 5639 TTGAAATTCTCCCGACAGGACGCGCCTATTATAAACGTTCGATGTGTACGGTTCGAAGGA 5580 Query 62450 CTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACT 62509 |||||| || ||||||||||| || ||||| || |||||||| ||||||| || || | Sbjct 5579 CTCATTGTTGCCCAAAATTTGTGCGGTTGAAGCCGTCGGCATCGGTGCCAACAGTAGAGA 5520 Query 62510 ATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCC 62567 ||| | || || ||| | | || || ||||| | | |||| ||||| || ||| Sbjct 5519 ATTGCGAATGCC--ATGCTTGGCAATCTTCTCTTTCAATTCCGCCCAGTTCCACAGGTCC 5462 Query 62568 GACGGTACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGC-GTACGATCCTAC 62626 | ||| || || | ||||| || || | | | | ||| | Sbjct 5461 GTAGGTGTCTTGTTCCACATATCGTACTGCAAGATACCCTTGCTTACCGGGCTA-CCTTC 5403 Query 62627 ATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTA 62686 || || || |||||||| || |||| | | || || ||||| || |||||||| Sbjct 5402 GTACGTCTCGTATGGTCCGTCACGGGCAGCCAACTCGCAGCTAGCCTCCAAGGCACCGTA 5343 Query 62687 ATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATA 62746 || || |||||||| || | || ||| || | ||| || ||| || || |||| || Sbjct 5342 GTAGATTGTTTCAAACATTTGCTGATTGAGTTTTTGGGCCTCCTCACTCTCGTATGGGTA 5283 Query 62747 ATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCT 62806 | || |||||||| || || | ||||| |||||||||||||| || || || | Sbjct 5282 TCGCATCAGGATAAACGCATCGGCCATACCTTGCACACCAATACCGATGGGCCTGTGGCG 5223 Query 62807 CTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG 62866 | | || || || || |||| ||||| || || || || || ||||| || | Sbjct 5222 CATGTTCGAACGACGCGCCTCCGGAACCGGATAGTAGTTGATGTCGATGATTTTGTTCAA 5163 Query 62867 ATTTC---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATC 62923 |||| | || | ||| | | ||||| ||||||||| |||||| | | ||| Sbjct 5162 GTTTCGCGTTACGGT--CTTAG-CGACATCTTTCAGTTTGCCAAAATCGTACGTACGATC 5106 Query 62924 ---TATTACAAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGC 62980 | | ||||||||||| || || | ||||| ||||| |||||||| | ||| | | Sbjct 5105 CGATCTCACAAACATGTTTAACGCGATCGATGCAAGATTGCACACGGCAATCTCGT---C 5049 Query 62981 ATCCGCA---TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATT 63037 | | | || | | ||||| |||||||| || ||||| || || || | || Sbjct 5048 CTTTGAAGAGTACTCCACGATCTCCGTGCAAAGGTTTGAGCACTTTATTGTGCCCACGTT 4989 Query 63038 TTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTC 63097 ||| || || |||||| ||||||||||||||| || || ||| | || || ||||| Sbjct 4988 TTGCTGGTTGCTCTTTCGGTTACACGCATCCTTGTACAGCATGTACGGCACGCCGGTTTC 4929 Query 63098 AATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTA-TTATAGATTTGTATC 63156 | ||| ||||| || || || ||| | | | | ||||||| || || | Sbjct 4928 CACCTGTGATTCAATTATGGCAAACCACAGGTCCTGCGCCTTTACTTGGCGAATAAAGCG 4869 Query 63157 TCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCA 63216 |||| || | ||||| ||| | |||||||| || ||||| || || Sbjct 4868 ACCTTCCT-TCTCGTAGCCCTCGTACCGTTTCTCGAACTCTTCGCCCCACGAATCAGACA 4810 Query 63217 ATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCA 63276 ||| || || |||| ||| ||||| | |||| | ||| | ||| |||||| |||| Sbjct 4809 ATCCGGGGCAATCATGCGGGCACATAAGACTCCACATTTCGTTAGCCTCCACTCGCTTCA 4750 Query 63277 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGT---TCCTCGT 63333 | || | ||| || |||||||| || ||| | | || ||| | | | || ||||| | Sbjct 4749 TGAATAAATCCGGTATCCAAAGGGC-ATAGA-ACATGTCTCGCGC-ACGTACCTCCTCCT 4693 Query 63334 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 63393 | ||||| |||||||| |||||||| ||| | | | |||| |||||||| |||| || Sbjct 4692 TCCCTGTGTTCTTTTTCAGATCGAGAAACTCGAACACATCACCGTGCCACGGCTCCAGGT 4633 Query 63394 ATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 63453 | || || | |||| || || || || ||||| ||||| | ||| | || ||||||| Sbjct 4632 AGATTGCAAATGCTCCGGGTCGCTTATTGCCTCCTTGATCGACGTACCGCGCCGTGTTAT 4573 Query 63454 TATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGC 63513 | || || | | ||| || | | ||| || || || ||||| || || | ||| || Sbjct 4572 TGTACACGCGAAGCATCGGCACCAAACCATTGGAGATTCCATTTGTGCCCGCGATGTACG 4513 Query 63514 CTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63573 ||| | ||||| ||| | | || || || || || || || || || | Sbjct 4512 TTCCCTTCGCACGGATACAATGCACGTTCAGCCCAATGCCACCGGCTGACTTTGATATCA 4453 Query 63574 ATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTA 63633 ||||| |||| | ||| || ||||| || || ||||| || ||| ||| | | | Sbjct 4452 GGGCGCACTGTTTCAGCGTATCGTAGATACCGTCAATGCTGTCGTCGGACATCGTCAACA 4393 Query 63634 GAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63693 | || ||| ||| | || |||| || ||||| ||| | || |||||||| | Sbjct 4392 GGAAGCAGGAAGAAAGCTGCGGACGTTGTGTCGCCGCAGCAAACATAGTTGGAGAAGCAT 4333 Query 63694 GCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATT 63753 | || || || || || || |||||||||||||| || || | || |||||| Sbjct 4332 GGGTGAAAAATCGCTCCGACAGCAGATTGTACGTCTCGATGGCCGCATCGATATCCTCGC 4273 Query 63754 GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGT 63813 ||||| || | || || ||||| | ||| ||||| || | ||| || || ||| | Sbjct 4272 CGTGAATACCGATGGCAACGCGCATCAGCATATGCTGGGGACGTTCGACGATCTTGCCCT 4213 Query 63814 TTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 63873 | ||||| | || ||||||| |||||||||||||| || ||||| || || ||||| Sbjct 4212 TAATTTTGAGCAGGTAGGATCGCTCCAAAGTTTTAAAGCCGAAATAATTATAGCCAAAGT 4153 Query 63874 CTCGTTCGTAAATAATAACCGAATTGAG 63901 | || ||||||||||| |||||||||| Sbjct 4152 CGCGATCGTAAATAATGGCCGAATTGAG 4125 >seq38620 Length=1898 Score = 131 bits (144), Expect = 2e-25 Identities = 185/258 (72%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 33569 TTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTT 33628 ||| ||||| | ||| || || ||||||||||| || ||||| | || | ||||| Sbjct 25 TTTGAACATGAGACAGGCAAAGTCGCAGTGCAGTCCTTCGTCGCGCGAGATCAGCTCGTT 84 Query 33629 AGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGA 33688 || ||||||||||| ||||| | ||| ||||| |||||||| || |||| || || Sbjct 85 CGAGAACGTGAGTCCTGGCATCAAGCCGCGCTTCTTAAGCCAGAAAATGGCCGCAAAACT 144 Query 33689 TCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGC 33748 ||| || ||||| || || || ||||| ||||||| || | || ||| | ||| Sbjct 145 ACCGCTGAAAAAGATACCCTCCACGGCAGCGAAGGCAACAACCCGTTCACCAAAGTTGGC 204 Query 33749 --GCTGTCATG-TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 33805 || | || ||||| || |||||||||||||||||||||| || || || | ||| Sbjct 205 CTTCTTGCTTGAGATCCAGTTCAGAGCCCAATCGGCCTTCTTTTTCACGCACGGTAGCGT 264 Query 33806 TTCTATGGCATTAAAGAG 33823 || || || ||||| || Sbjct 265 CTCGATCGCGTTAAACAG 282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629415713389440