Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq1636 484 9e-132 seq38620 122 1e-22 >seq1636 Length=7642 Score = 484 bits (536), Expect = 9e-132 Identities = 1250/1888 (66%), Gaps = 40/1888 (2%) Strand=Plus/Minus Query 64830 TTGTCCAATGTGAATTGAATGGGAGCGGAT---GCGGGTTTCGTACGTAGATAGTACATT 64886 ||||||| ||||| ||||||| || | || || || ||||| | |||||||| Sbjct 5995 TTGTCCACCGTGAACTGAATGG---CGTTTACCGCCGGCTTGGTACGCAAGTAGTACATG 5939 Query 64887 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 64946 |||||||| || || | |||| ||||| ||||| || || || ||| |||| || Sbjct 5938 CCCGTTTTAAGGCCCATCTTCCAGCCGTAGAAATGGATCGATGTCAGCTTGCCATAATTC 5879 Query 64947 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 65006 || || || | || || || | || || |||||| || || ||||| | ||| || Sbjct 5878 GGTTCAGCCACGTGAATGTTGAACGACTGTGATTGATCTATAAACGCTCCTCGGTCGGCG 5819 Query 65007 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAAT 65065 ||||| || ||| || ||| || || ||||| | ||||| |||| || | ||| Sbjct 5818 GCCATCTTGATGGAAGTTTTTACTGATATCTCCCAGACCGTTTTGTAAATGTCACG-AAT 5760 Query 65066 ATCTTCTGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTT 65122 |||| |||| | ||| ||||| || ||||| | |||| ||| | | | Sbjct 5759 CTCTTGGGGAATTTCCGTAATTTTCTGGATCGATCCGTTGTGCGCCAGAATTCGGTGTCT 5700 Query 65123 GATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTAC 65182 || ||||| | ||| || | ||| || || | | |||||||| |||| || || Sbjct 5699 CATATCATCGTCCCACAAGCCACACTCCGTCAAGTCCTTCAGGAGATGGTGATTCACCAC 5640 Query 65183 TTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGA 65242 |||||||||||| |||| || | || | | |||| || || |||||||| | || Sbjct 5639 TTGAAATTCTCCCGACAGGACGCGCCTATTATAAACGTTCGATGTGTACGGTTCGAAGGA 5580 Query 65243 CTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACT 65302 |||||| || ||||||||||| || ||||| || |||||||| ||||||| || || | Sbjct 5579 CTCATTGTTGCCCAAAATTTGTGCGGTTGAAGCCGTCGGCATCGGTGCCAACAGTAGAGA 5520 Query 65303 ATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCC 65360 ||| | || || ||| | | || || ||||| | |||| ||||| || ||| Sbjct 5519 ATTGCGAATGCC--ATGCTTGGCAATCTTCTCTTTCAATTCCGCCCAGTTCCACAGGTCC 5462 Query 65361 GACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATCCTAC 65419 | ||| || | ||||| || || | | | | ||| | Sbjct 5461 GTAGGTGTCTTGTTCCACATATCGTACTGCAAGATACCCTTGCTTACCGGGCTA-CCTTC 5403 Query 65420 ATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTA 65479 || || ||||||||||| || |||| | || || || ||||| || |||||||| Sbjct 5402 GTACGTCTCGTATGGTCCGTCACGGGCAGCCAACTCGCAGCTAGCCTCCAAGGCACCGTA 5343 Query 65480 ATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATA 65539 || || ||||| || || | || ||| || | ||| || ||| || || |||| || Sbjct 5342 GTAGATTGTTTCAAACATTTGCTGATTGAGTTTTTGGGCCTCCTCACTCTCGTATGGGTA 5283 Query 65540 ATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCT 65599 | || |||||||| || || | ||||| |||||||||||||| || || || | Sbjct 5282 TCGCATCAGGATAAACGCATCGGCCATACCTTGCACACCAATACCGATGGGCCTGTGGCG 5223 Query 65600 CTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG 65659 | | || || || || |||| ||||| || || || || || ||||| || | Sbjct 5222 CATGTTCGAACGACGCGCCTCCGGAACCGGATAGTAGTTGATGTCGATGATTTTGTTCAA 5163 Query 65660 ATTTC---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAAT---CGCTC 65713 |||| | || | ||| | | ||||| ||||||||| |||||| | || || Sbjct 5162 GTTTCGCGTTACGGT--CTTAG-CGACATCTTTCAGTTTGCCAAAATCGTACGTACGATC 5106 Query 65714 ATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGC 65773 | | ||||||||||| || || | ||||| ||||| || ||||| | ||| | | Sbjct 5105 CGATCTCACAAACATGTTTAACGCGATCGATGCAAGATTGCACACGGCAATCTCGT---C 5049 Query 65774 ATCCGCA---TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATT 65830 | | | || | | ||||| |||||||| || ||||| || || || | || Sbjct 5048 CTTTGAAGAGTACTCCACGATCTCCGTGCAAAGGTTTGAGCACTTTATTGTGCCCACGTT 4989 Query 65831 TTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTC 65890 ||| || || |||||| ||||||||||||||| || || ||| | || || ||||| Sbjct 4988 TTGCTGGTTGCTCTTTCGGTTACACGCATCCTTGTACAGCATGTACGGCACGCCGGTTTC 4929 Query 65891 AATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTA-TTATAGATTTGTATC 65949 | ||| ||||| || || || ||| | | | | ||||||| || || | Sbjct 4928 CACCTGTGATTCAATTATGGCAAACCACAGGTCCTGCGCCTTTACTTGGCGAATAAAGCG 4869 Query 65950 TCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCA 66009 | || || | ||||| ||| | |||||||| || ||||| || || Sbjct 4868 ACCTTCCT-TCTCGTAGCCCTCGTACCGTTTCTCGAACTCTTCGCCCCACGAATCAGACA 4810 Query 66010 ATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCA 66069 |||| || || |||| ||| ||||| | |||| | ||| | ||| |||||| |||| Sbjct 4809 ATCCGGGGCAATCATGCGGGCACATAAGACTCCACATTTCGTTAGCCTCCACTCGCTTCA 4750 Query 66070 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGT---TCCTCGT 66126 | || | ||| || |||||||| || ||| | | || ||| | | | || ||||| | Sbjct 4749 TGAATAAATCCGGTATCCAAAGGGC-ATAGA-ACATGTCTCGCGC-ACGTACCTCCTCCT 4693 Query 66127 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGT 66186 | ||||| |||||||| |||||||| ||| | | | |||| |||||||| |||| || Sbjct 4692 TCCCTGTGTTCTTTTTCAGATCGAGAAACTCGAACACATCACCGTGCCACGGCTCCAGGT 4633 Query 66187 ATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 66246 | || || | |||| || || || || ||||| ||||| | ||| | || ||||||| Sbjct 4632 AGATTGCAAATGCTCCGGGTCGCTTATTGCCTCCTTGATCGACGTACCGCGCCGTGTTAT 4573 Query 66247 TATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGC 66306 | || || | | ||| || | | ||||||||| | ||||| || || | ||| || Sbjct 4572 TGTACACGCGAAGCATCGGCACCAAACCATTGGAGATTCCATTTGTGCCCGCGATGTACG 4513 Query 66307 TTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 66366 |||| | ||||| ||| | | || || || || || || || || || | Sbjct 4512 TTCCCTTCGCACGGATACAATGCACGTTCAGCCCAATGCCACCGGCTGACTTTGATATCA 4453 Query 66367 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 66426 ||||| |||| | |||||| ||||| || || || || || || ||| | | | Sbjct 4452 GGGCGCACTGTTTCAGCGTATCGTAGATACCGTCAATGCTGTCGTCGGACATCGTCAACA 4393 Query 66427 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 66486 | || ||| ||| | || |||| || ||||| ||| | || |||||||| | Sbjct 4392 GGAAGCAGGAAGAAAGCTGCGGACGTTGTGTCGCCGCAGCAAACATAGTTGGAGAAGCAT 4333 Query 66487 GCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATT 66546 | || || || || || || |||||||||||||| || || | || |||||| Sbjct 4332 GGGTGAAAAATCGCTCCGACAGCAGATTGTACGTCTCGATGGCCGCATCGATATCCTCGC 4273 Query 66547 GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGT 66606 ||||| || | || || ||||| | ||| ||||| || | ||| ||||||||| | Sbjct 4272 CGTGAATACCGATGGCAACGCGCATCAGCATATGCTGGGGACGTTCGACGATCTTGCCCT 4213 Query 66607 TTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 66666 | ||||| | || ||||||| |||||||||||||| || ||||| || || ||||| Sbjct 4212 TAATTTTGAGCAGGTAGGATCGCTCCAAAGTTTTAAAGCCGAAATAATTATAGCCAAAGT 4153 Query 66667 CTCGTTCGTAAATAATAACCGAGTTGAG 66694 | || ||||||||||| |||| ||||| Sbjct 4152 CGCGATCGTAAATAATGGCCGAATTGAG 4125 >seq38620 Length=1898 Score = 122 bits (134), Expect = 1e-22 Identities = 183/258 (71%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 36145 TTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTT 36204 ||| ||||| | ||| || || |||||||| || || ||||| | || | ||||| Sbjct 25 TTTGAACATGAGACAGGCAAAGTCGCAGTGCAGTCCTTCGTCGCGCGAGATCAGCTCGTT 84 Query 36205 GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGA 36264 || ||||||||||| ||||| | ||| ||||| |||||||| || |||| |||||| Sbjct 85 CGAGAACGTGAGTCCTGGCATCAAGCCGCGCTTCTTAAGCCAGAAAATGGCCGCAAAACT 144 Query 36265 TCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC 36324 || || || || || || || || || ||||||| || | || ||| | ||| Sbjct 145 ACCGCTGAAAAAGATACCCTCCACGGCAGCGAAGGCAACAACCCGTTCACCAAAGTTGGC 204 Query 36325 --ACTGTCATG-TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGT 36381 || | || ||||| || |||||||||||||||||||||| || || || | || Sbjct 205 CTTCTTGCTTGAGATCCAGTTCAGAGCCCAATCGGCCTTCTTTTTCACGCACGGTAGCGT 264 Query 36382 CTCTATAGCATTAAAGAG 36399 ||| || || ||||| || Sbjct 265 CTCGATCGCGTTAAACAG 282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657752819936320