Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq46841 89.7 4e-13 >seq46841 Length=989 Score = 89.7 bits (98), Expect = 4e-13 Identities = 113/153 (74%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 33565 CGCATACCAGAGATGGGCGACAAGTTTGCATCGT-TCACGGCCCAGAAGGGCACGTGCGG 33623 ||||| || |||| |||||||||||||| || |||||| | ||||||| || ||||| Sbjct 555 CGCATCCCGCAGATAGGCGACAAGTTTGCGTCCCGTCACGGTC-AGAAGGGTACATGCGG 613 Query 33624 CATGATGTACGACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGT 33683 || |||| |||| ||||||||| |||||| || || | |||||| | | Sbjct 614 TATTCAGTACCGCCAGGAGGACATGCCATTCACGTGTGAGGGTATAACGCCGGACATTAT 673 Query 33684 CATCAACCCGCATGCGTTCCCCTCGCGCATGAC 33716 |||||||||||| || | || ||||| ||||| Sbjct 674 CATCAACCCGCACGCCATTCCGTCGCGTATGAC 706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356011970156344