Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq38620 107 2e-18 seq50967 102 8e-17 >seq38620 Length=1898 Score = 107 bits (118), Expect = 2e-18 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 52552 CCGTGTGTGCGCAAAAAGGATGATTGGGCATTGAAATGGATCGAAAACGACAAAGCCACT 52611 ||||| ||| || |||| |||||||| |||| |||||| || | | || |||| Sbjct 258 CCGTGCGTGAAAAAGAAGGCCGATTGGGCTCTGAACTGGATCTCAAGCAAGAAGGCCAAC 199 Query 52612 TTTGCCGAACGTCTGGTCGCGTTTGCTATAGTGGAAGGTGTGtttttttCGGGTAGTTTT 52671 |||| ||||| | || || || ||| ||||| ||| | ||||| ||||||||| Sbjct 198 TTTGGTGAACGGGTTGTTGCCTTCGCTGCCGTGGAGGGTATCTTTTTCAGCGGTAGTTTT 139 Query 52672 GCGGCAATATTTTACATCAAAACCTTGGGCATAATGCCCGGCCTCACGTTTAGCAACGAG 52731 ||||| || || | | || | ||| | ||||| || |||||||| |||||| Sbjct 138 GCGGCCATTTTCTGGCTTAAGAAGCGCGGCTTGATGCCAGGACTCACGTTCTCGAACGAG 79 Query 52732 TTGATATCGCGCGACGAAGGAATGCACACAGATTTTGCGTGT 52773 |||| ||||||||||||||| ||||| || ||||| ||| Sbjct 78 CTGATCTCGCGCGACGAAGGACTGCACTGCGACTTTGCCTGT 37 >seq50967 Length=297 Score = 102 bits (112), Expect = 8e-17 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| ||||| | |||||| || || || | || || ||||| || ||||| ||||| Sbjct 79 GCCTCCTCGCAGACGCAACACCAAATGCAGAGTCGATTCTTTCTGGATGTTGTAATCCGA 138 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || |||| ||||| ||||| || || || |||| ||||| || ||||| || || Sbjct 139 CAAGGTGCGACCATCTTCCAGCTGCTTTCCGGCGAAGATAAGACGCTGTTGATCTGGCGG 198 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTCCA 139715 || |||||||| || ||| | |||| || | | || | || |||| ||||||| Sbjct 199 GATTCCTTCTTTATCC-TGAATCTTTGCCTTGACGTTCTCGATCGTATCGGATGGCTCCA 257 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAA 139755 |||| | || | ||| |||||||||| ||||| ||||| Sbjct 258 CCTCGAGAGTGATCGTTTTGCCGGTCAGAGTTTTGACGAA 297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495747461561600