Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1636 482 3e-131 seq38620 147 3e-30 >seq1636 Length=7642 Score = 482 bits (534), Expect = 3e-131 Identities = 1259/1900 (66%), Gaps = 64/1900 (3%) Strand=Plus/Minus Query 78709 TTGTCCAATGTGAATTGAATGGGAGCGGAT---GCGGGTTTCGTACGTAGATAGTACATT 78765 ||||||| ||||| ||||||| || | || || || ||||| | |||||||| Sbjct 5995 TTGTCCACCGTGAACTGAATGG---CGTTTACCGCCGGCTTGGTACGCAAGTAGTACATG 5939 Query 78766 CCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTC 78825 |||||||| || || | |||| ||||||||||| || || || ||| |||| || Sbjct 5938 CCCGTTTTAAGGCCCATCTTCCAGCCGTAGAAATGGATCGATGTCAGCTTGCCATAATTC 5879 Query 78826 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 78885 || || || | || || || | || || |||||| || || ||||| | ||| || Sbjct 5878 GGTTCAGCCACGTGAATGTTGAACGACTGTGATTGATCTATAAACGCTCCTCGGTCGGCG 5819 Query 78886 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAAT 78944 ||||| || ||| || ||| || || ||||| | ||||| |||| || | ||| Sbjct 5818 GCCATCTTGATGGAAGTTTTTACTGATATCTCCCAGACCGTTTTGTAAATGTCACG-AAT 5760 Query 78945 ATCTTCTGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTT 79001 |||| |||| | ||| ||||| || ||||| | |||| ||| | | | Sbjct 5759 CTCTTGGGGAATTTCCGTAATTTTCTGGATCGATCCGTTGTGCGCCAGAATTCGGTGTCT 5700 Query 79002 GATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTAC 79061 || || || | ||| || | ||| || || | | |||||||| |||| || || Sbjct 5699 CATATCATCGTCCCACAAGCCACACTCCGTCAAGTCCTTCAGGAGATGGTGATTCACCAC 5640 Query 79062 TTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGA 79121 |||||||||||| |||| || | || | | |||| || || || ||||| | || Sbjct 5639 TTGAAATTCTCCCGACAGGACGCGCCTATTATAAACGTTCGATGTGTACGGTTCGAAGGA 5580 Query 79122 TTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACT 79181 ||||| || ||||||||||| || ||||| ||||| ||||| ||||||| || || | Sbjct 5579 CTCATTGTTGCCCAAAATTTGTGCGGTTGAAGCCGTCGGCATCGGTGCCAACAGTAGAGA 5520 Query 79182 ATTTCTAAGACCGTATGATCTG--ATTTTATCTTTTAGAGATTCC---CAATCCCAAAGA 79236 ||| | || || ||| | | || || ||||| | ||||| || | ||| || Sbjct 5519 ATTGCGAATGCC--ATGCTTGGCAATCTTCTCTTTCA---ATTCCGCCCAGTTCCACAGG 5465 Query 79237 TCAGACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACT-AGCGTATGATCC 79295 || | || ||||| | ||| || || | ||||| || || | || | || Sbjct 5464 TCCGTAGGTGTCTTGTTCCACATATCGTACTGCAAGATACCCTTGCTTACCGGGCTA-CC 5406 Query 79296 TGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCC 79355 | ||| || || || ||||| || | || || || || || ||||| || || || Sbjct 5405 TTCGTACGTCTCGTATGGTCCGTCACGGGCAGCCAACTCGCAGCTAGCCTCCAAGGCACC 5346 Query 79356 GTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGG 79415 ||| || || ||||| || || | || |||||| | ||| || || || || |||| Sbjct 5345 GTAGTAGATTGTTTCAAACATTTGCTGATTGAGTTTTTGGGCCTCCTCACTCTCGTATGG 5286 Query 79416 ATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATG 79475 || | || |||||||| || || | ||||| |||||||||||||| || || || Sbjct 5285 GTATCGCATCAGGATAAACGCATCGGCCATACCTTGCACACCAATACCGATGGGCCTGTG 5226 Query 79476 TCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATT 79535 | | | || ||| || || |||| ||||| || || || || || ||||| || Sbjct 5225 GCGCATGTTCGAACGACGCGCCTCCGGAACCGGATAGTAGTTGATGTCGATGATTTTGTT 5166 Query 79536 GAGATTCC---TGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTCC 79592 | || | | || | ||| | | ||||| || |||||| |||||| | ||| | Sbjct 5165 CAAGTTTCGCGTTACGGT--CTTAG-CGACATCTTTCAGTTTGCCAAAATCGTA-CGTAC 5110 Query 79593 -ATC---TATTACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCAT 79648 ||| | | ||||||||||| ||||||| ||||| ||||| || ||||| | ||| | Sbjct 5109 GATCCGATCTCACAAACATGTTTAACGCGATCGATGCAAGATTGCACACGGCAATCTCGT 5050 Query 79649 TAGCATCCGCA---TATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTA 79705 | | | | || | | || || ||||| ||||| ||||| || || || | Sbjct 5049 ---CCTTTGAAGAGTACTCCACGATCTCCGTGCAAAGGTTTGAGCACTTTATTGTGCCCA 4993 Query 79706 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAG 79765 ||||| || || |||||| ||||||||||||||| || || ||| |||| || | Sbjct 4992 CGTTTTGCTGGTTGCTCTTTCGGTTACACGCATCCTTGTACAGCATGTACGGCACGCCGG 4933 Query 79766 TTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATT------ATAG 79819 |||| | ||| ||||| || || || ||| | | | | ||||||| | ||| Sbjct 4932 TTTCCACCTGTGATTCAATTATGGCAAACCACAGGTCCTGCGCCTTTACTTGGCGAATAA 4873 Query 79820 A-----CTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCC 79874 | ||| |||| | | || |||| || | | ||||||| || || Sbjct 4872 AGCGACCTTCCTTCTCGTAGCCCT--CGTACCGTTTCT---------CGAACTCTTCGCC 4824 Query 79875 CCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATC 79934 ||| ||| ||||| || || || | || ||||| | |||| | | | | | Sbjct 4823 CCACGAATCAGACAATCCGGGGCAATCATGCGGGCACATAAGACTCCACATTTCGTTAGC 4764 Query 79935 CTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTC 79993 || ||||| ||||| || | ||| || |||||||| || ||| || | |||| | | Sbjct 4763 CTCCACTCGCTTCATGAATAAATCCGGTATCCAAAGGGC-ATAGAACATGTCTCGCGCAC 4705 Query 79994 TATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCC 80053 |||||| || ||||| |||||||| |||||||| ||| | | | |||| |||| Sbjct 4704 GTACCTCCTCCTTCCCTGTGTTCTTTTTCAGATCGAGAAACTCGAACACATCACCGTGCC 4645 Query 80054 ACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATC 80113 |||| |||| ||| || || | |||| ||||| || || ||||| ||||| | ||| | Sbjct 4644 ACGGCTCCAGGTAGATTGCAAATGCTCCGGGTCGCTTATTGCCTCCTTGATCGACGTACC 4585 Query 80114 TAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCC 80173 || |||||||| || || | | ||| || | | ||||||||| | ||||| || | Sbjct 4584 GCGCCGTGTTATTGTACACGCGAAGCATCGGCACCAAACCATTGGAGATTCCATTTGTGC 4525 Query 80174 CGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCA 80233 | | ||| || |||| | ||||| ||| | | || || || || || || Sbjct 4524 CCGCGATGTACGTTCCCTTCGCACGGATACAATGCACGTTCAGCCCAATGCCACCGGCTG 4465 Query 80234 TTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAA 80293 || || || | ||||| |||| | |||||| ||||| || || ||||| || || Sbjct 4464 ACTTTGATATCAGGGCGCACTGTTTCAGCGTATCGTAGATACCGTCAATGCTGTCGTCGG 4405 Query 80294 TCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGG 80353 ||| | | || || ||| ||| | || |||| || ||||| ||| | | Sbjct 4404 ACATCGTCAACAGGAAGCAGGAAGAAAGCTGCGGACGTTGTGTCGCCGCAGCAAACATAG 4345 Query 80354 TAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATT 80413 | |||||||| || || || || || ||||| |||||||||||||| || || | | Sbjct 4344 TTGGAGAAGCATGGGTGAAAAATCGCTCCGACAGCAGATTGTACGTCTCGATGGCCGCAT 4285 Query 80414 CTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAA 80473 | |||||| ||||| || | || || ||||| | ||| ||||| || | ||| | Sbjct 4284 CGATATCCTCGCCGTGAATACCGATGGCAACGCGCATCAGCATATGCTGGGGACGTTCGA 4225 Query 80474 CGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGT 80533 |||||||| || ||||| | || ||| ||| |||||||||||||| || ||||| | Sbjct 4224 CGATCTTGCCCTTAATTTTGAGCAGGTAGGATCGCTCCAAAGTTTTAAAGCCGAAATAAT 4165 Query 80534 TGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 80573 | || |||||| || ||||||||||| |||| ||||| Sbjct 4164 TATAGCCAAAGTCGCGATCGTAAATAATGGCCGAATTGAG 4125 >seq38620 Length=1898 Score = 147 bits (162), Expect = 3e-30 Identities = 191/260 (73%), Gaps = 7/260 (3%) Strand=Plus/Plus Query 49947 TTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTT 50006 ||| ||||| | ||| || || ||||||||||| || ||||| | || || ||||| Sbjct 25 TTTGAACATGAGACAGGCAAAGTCGCAGTGCAGTCCTTCGTCGCGCGAGATCAGCTCGTT 84 Query 50007 GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAA--T 50064 || ||||||||||| ||||| | ||| ||||| |||||||| || |||| |||||| | Sbjct 85 CGAGAACGTGAGTCCTGGCATCAAGCCGCGCTTCTTAAGCCAGAAAATGGCCGCAAAACT 144 Query 50065 GACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTG 50124 | | |||| ||||| || || || || || |||||||||| | || ||| | || Sbjct 145 ACCGCTGAAA--AAGATACCCTCCACGGCAGCGAAGGCAACAACCCGTTCACCAAAGTTG 202 Query 50125 GC--GCTGTCATG-TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATC 50181 || || | || ||||| || |||||||||||||||||||||| || || || | | Sbjct 203 GCCTTCTTGCTTGAGATCCAGTTCAGAGCCCAATCGGCCTTCTTTTTCACGCACGGTAGC 262 Query 50182 GTTTCTATGGCATTAAAGAG 50201 || || || || ||||| || Sbjct 263 GTCTCGATCGCGTTAAACAG 282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717810472678720