Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq50967 95.1 8e-15 seq20890 82.4 5e-11 >seq50967 Length=297 Score = 95.1 bits (104), Expect = 8e-15 Identities = 147/209 (70%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 |||||||||||||||| ||||| ||||| || || |||||||| ||||| || | Sbjct 92 CGCAACACCAAATGCAGAGTCGATTCTTTCTGGATGTTGTAATCCGACAAGGTGCGACCA 151 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274 || |||| |||||||| || || | ||| || || || | || || |||||||| Sbjct 152 TCTTCCAGCTGCTTTCCGGCGAAGATAAGACGCTGTTGATCTGGCGGGATTCCTTCTTTA 211 Query 33275 TCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331 || |||| ||| || || | | ||||| ||| || | || || ||||| Sbjct 212 TCCTGAATCTTTGCC---TTGACGTTCTCGATCGTATCGGATGGCTCCACCTCGAGAGTG 268 Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAA 33360 |||||||| || || |||||||| ||||| Sbjct 269 ATCGTTTTGCCGGTCAGAGTTTTGACGAA 297 >seq20890 Length=2679 Score = 82.4 bits (90), Expect = 5e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 33160 CACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATC 33219 ||||| ||| | |||||||| || || || ||||||||||||| || || ||| || Sbjct 1427 CACCAGATGAAGGGTCGACTCCTTCTGAATGTTGTAATCAGACAGCGTGCGTCCGTCCTC 1486 Query 33220 CAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCT 33279 || ||||| || || || | ||| ||||| || | ||| || || || || || Sbjct 1487 CAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGATCTGGGGGGATACCCTCCTTGTCCTG 1546 Query 33280 AATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTT 33339 ||| ||| || | | ||||| || ||||| ||| || || || || || || Sbjct 1547 GATCTTGGCTTTCACATTCTCGATCGTATCCGAGGGTTCAACCTCAAGGGTAATGGTCTT 1606 Query 33340 TCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372 ||||| || ||||| ||||| || ||||| || Sbjct 1607 ACCCGTGAGGGTTTTCACGAAGATCTGCATCTT 1639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318579273313104