Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq50967 91.5 1e-13 seq3519 82.4 6e-11 >seq50967 Length=297 Score = 91.5 bits (100), Expect = 1e-13 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 |||||||| | | |||||||||||| || || |||||||| || ||||||||||| | Sbjct 80 CCTCCTCGCAGACGCAACACCAAATGCAGAGTCGATTCTTTCTGGATGTTGTAATCCGAC 139 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATC-GACGGG 20100 | || | |||||||| || || || || | ||||| | ||||||||| | |||| Sbjct 140 AAGGTGCGACCATCTTCCAGCTGCTTTCCGGCGAAGATAAGACGCTGTTGATCTGGCGGG 199 Query 20101 CACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGT 20160 | |||||||| || ||| ||| || || | | | | |||| || ||| Sbjct 200 -ATTCCTTCTTTATCCTGAATCTTTGCCTTGACGTTCTCGATCGTATCGGATGGCTCCAC 258 Query 20161 TTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAA 20199 || | || || ||||||||||||| |||||||| || Sbjct 259 CTCGAGAGTGATCGTTTTGCCGGTCAGAGTTTTGACGAA 297 >seq3519 Length=1813 Score = 82.4 bits (90), Expect = 6e-11 Identities = 102/137 (74%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 |||||||||| || | |||||||||||| || || |||||||| || ||||||||||| Sbjct 1617 TTCCTCCTCGCAAACGCAACACCAAATGCAGAGTCGATTCTTTCTGGATGTTGTAATCCG 1676 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATC-GACG 20098 || || | |||||||| || || || || | ||||| | ||||||||| | || Sbjct 1677 ACAAGGTGCGACCATCTTCCAGCTGCTTTCCGGCGAAGATAAGACGCTGTTGATCTGGCG 1736 Query 20099 GGCACGCCTTCTTTGTC 20115 || | ||||| || || Sbjct 1737 GG-ATTCCTTCCTTATC 1752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419326154872488