Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq44410 98.7 9e-16 >seq44410 Length=2181 Score = 98.7 bits (108), Expect = 9e-16 Identities = 146/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 5585 TCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAA- 5643 ||||| || | || || || || || || | || || |||||||| | ||||| Sbjct 630 TCGCATATGAATTGAGCGATGCGATCTCCTTTTTTAACTTCGAAATCAGCTT--CCGAAT 687 Query 5644 -GTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCA 5702 |||||||||||| || || ||||| ||||| ||||| | || | || || || || | Sbjct 688 GGTTGAACAGCACAACACCAACGTTTCCGCGATAGTCTTCATCGACGACACCGGCACCGA 747 Query 5703 CGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTAGCACCCAT 5762 | |||||||| | ||| || || || || || ||||| || || |||||||| || || | Sbjct 748 CATCGATGAAATTCTTCACAGCAAGCCCTGACCGGGGTGCTACTCGGCCGTAACAGCCTT 807 Query 5763 CGGGAAGCTGTATCTGCAGGTCCGT 5787 |||| | ||||| || | ||| || Sbjct 808 CGGGTACCTGTACTTGGATGTCGGT 832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429786842730176