Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq885 134 2e-26 >seq885 Length=6935 Score = 134 bits (148), Expect = 2e-26 Identities = 225/323 (70%), Gaps = 8/323 (2%) Strand=Plus/Plus Query 164783 TTCATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATA 164842 |||||||| |||| || ||||| |||| | ||||| |||||||| ||| || |||| Sbjct 5389 TTCATGATACAGTTGTCAATCAACTGCTGGCAAAAATTGATGGTGTTGAACAGTTGAATA 5448 Query 164843 ATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGAC 164902 ||||||| | | || ||||| ||||| ||| | || || || ||||| || ||| Sbjct 5449 ATATTTTGGTCATTGGAATGACTAACCGCAGGGATATGATAGACGAAGCTTTGCTAAGAC 5508 Query 164903 CTGGTCGATTAGAATTGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAA 164962 | ||||| ||||| || |||| ||||| | | || | |||||||||| | || | Sbjct 5509 CCGGTCGCTTAGAGGTGCAAATGGAAATTAGTCTTCCAAATGAAGAAGGACGAGTGCAGA 5568 Query 164963 TTTTAAAAGTTCAT--GTGGCTAA--AATGAAATCCTGTGATATATTATCTCCCGATGTA 165018 ||||||| | ||| | | || || ||| || | | |||| ||||||||||| Sbjct 5569 TTTTAAACATCCATACACGACGAATGAAGGAATTC----AAAAAATTAGCTCCCGATGTA 5624 Query 165019 GATTTAAATAAAATAGCTGCCGAAACTAAAAATTATAGTGGTGCTGAATTAGAGGGATTA 165078 |||||| | | | | ||||||||||||| || ||||| ||| | || |||||| Sbjct 5625 GATTTACGAGAGCTCGGAGTAAAAACTAAAAATTACAGCGGTGCCGAACTGGAAGGATTA 5684 Query 165079 GTAAGAGCCGCTCAATCAACCGC 165101 || | || || ||||| || || Sbjct 5685 GTTCGTGCTGCACAATCTACTGC 5707 Score = 125 bits (138), Expect = 9e-24 Identities = 212/304 (70%), Gaps = 6/304 (2%) Strand=Plus/Plus Query 164393 ATTGGAATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCA 164452 ||||| |||| | | ||||||| | ||||| | ||||| |||||| | || ||| Sbjct 4907 ATTGGGATTTCGGAAGAATGGGAATTGGTGGCTTGGATCGCGAATTTAATGCCATCTTCC 4966 Query 164453 GACGAGCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAAC 164512 | ||||||||||||||| | | ||||| ||| | | || | | || ||||| | Sbjct 4967 GGCGAGCATTTGCTTCTCGTGTATTTCCTCCGGAAGTTGTTGAACAGCTGGGTTGTAAGC 5026 Query 164513 ATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGAT 164572 || | |||||||| | | ||||||||||||| ||||||||| | ||||| || Sbjct 5027 ATGTGAAAGGAATACTGCTTTATGGACCTCCTGGAACTGGTAAAACACTGATGGCCCGTC 5086 Query 164573 GCATTGCTCAAGCTTTTAAA---TCGCGACCCGTTAAAATTGTTAATGGTCCTGAATTAT 164629 |||| || | ||||| |||||| ||| |||||||| ||||| || | | | Sbjct 5087 AAATTG-GCACCATGTTAAATGCTCGCGAACCG--AAAATTGTAAATGGCCCACAGATTT 5143 Query 164630 TGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAG 164689 | | ||||| || || || || ||||||||||| ||| ||||||| || || |||| Sbjct 5144 TAGATAAATACGTCGGCGAATCTGAAGCTAATGTGCGAAGGTTGTTTGCCGATGCCGAAG 5203 Query 164690 AAGA 164693 |||| Sbjct 5204 AAGA 5207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595491774076800