Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq2949 134 1e-26 seq1636 100 3e-16 seq20012 82.4 7e-11 >seq2949 Length=10021 Score = 134 bits (148), Expect = 1e-26 Identities = 212/304 (70%), Gaps = 0/304 (0%) Strand=Plus/Minus Query 71670 AAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTC 71729 |||| || || || | ||||| | ||||||| |||| | || || || ||||| | Sbjct 9235 AAACACACGACGACTTGTGGAACTCGGCTCAGCTACAGATGGTAAAGGAAGGCAAAATGC 9176 Query 71730 ACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGC 71789 |||| | ||| || ||||||||||| || || || ||||| ||||| |||| || || Sbjct 9175 ACGGCTTCCTGCGAATGTACTGGGCGAAGAAAATCCTCGAATGGACCAAAACGCCTGAAG 9116 Query 71790 AGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTA 71849 |||||||||| | | || ||||| ||||| | ||||||||||| || |||||||| | Sbjct 9115 AGGCGCTCGAATCAGCCATCTATCTGAACGACCGGTACAGTCTCGATGGACGCGATCCAA 9056 Query 71850 ACGGTTATGTCGGTTGCATGTGGAGCATTTGCGGTCTTCACGATAGAAGCTTTTTAGAAC 71909 |||| || || || || |||||| || ||| | || ||| ||| ||| | Sbjct 9055 ACGGGTACGTTGGCTGTATGTGGTCGATCGCGGGTATCCATGATCAGGGCTGGAAAGAGC 8996 Query 71910 GTCAAGTGTTTGGTAAAATTCGCTATATGAATCGTAATGGTTGCGAACGCAAGTTCAATG 71969 | | | ||||| || ||||| || ||||| | || ||| || | || ||||||| Sbjct 8995 GCGATATATTTGGAAAGATTCGATACATGAACTACGAAGGCTGCAAAAGAAAATTCAATG 8936 Query 71970 TGAA 71973 | || Sbjct 8935 TTAA 8932 >seq1636 Length=7642 Score = 100 bits (110), Expect = 3e-16 Identities = 198/282 (70%), Gaps = 11/282 (4%) Strand=Plus/Minus Query 147446 GAGATGCTGATTGACCACTTGATACTCGCCCGACAGAACTCTTCGTACGTACAAAT-TAC 147504 |||||| ||||| ||||||||| | || |||||||| || | | || || ||| | | Sbjct 5657 GAGATGGTGATTCACCACTTGAAATTCTCCCGACAGGACGCGCC-TAT-TATAAACGTTC 5600 Query 147505 TA-GTAAACGGCTCGAACGACTCGTTGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGC 147563 | || |||| ||||| ||||| ||||| || | ||| ||||| || | ||||||||| Sbjct 5599 GATGTGTACGGTTCGAAGGACTCATTGTTGCCCAAAATTTGTGCGGTTGAAGCCGTCGGC 5540 Query 147564 ATGTAAGCAATCAATAATGAATTGCGTAAGCCGTGCATAGCCAT-TTCTCGCTTAAGCTC 147622 || || | || || |||||||| | ||| ||| | || || ||||| || | || Sbjct 5539 ATCGGTGCCAACAGTAGAGAATTGCGAATGCCATGCTTGGCAATCTTCTC-TTTCAATTC 5481 Query 147623 GTCCCAGTTCCAAAGATCATTCGATTGGT-TAATATTCCACAAATCAAACTGTAAAAGTC 147681 |||||||||| || || || | ||| | | ||||||| ||| |||| || | | Sbjct 5480 CGCCCAGTTCCACAGGTC---CG-TAGGTGTCTTGTTCCACATATCGTACTGCAAGATAC 5425 Query 147682 CACAACTTGCAGGGCTTCCATCGTAAGAATCGTATGTTCCGT 147723 | ||| | ||||| || ||||| | ||||||| ||||| Sbjct 5424 CCTTGCTTACCGGGCTACCTTCGTACGTCTCGTATGGTCCGT 5383 >seq20012 Length=3655 Score = 82.4 bits (90), Expect = 7e-11 Identities = 160/234 (68%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 || ||||| | || || ||||| | ||||| || | || || |||| | || | Sbjct 2715 AAGATGCAGATTTTCGTCAAAACGCTCACTGGGAAGACCATAACTCTCGAGGTCGAGCCC 2656 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 ||||||||||| | || || |||||| || |||||||| || || || ||| Sbjct 2655 TCTGACACCATCGAAAATGTGAAGGCAAAGATCCAGGATAAAGAAGGTATTCCACCAGAT 2596 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTA 26944 || || | || || | || ||||||||| || || |||| | | |||| | ||||| Sbjct 2595 CAGCAGCGTCTGATCTTCGCCGGCAAACAGCTGGAGGATGGTCG-TACGTTGTCTGACTA 2537 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAA 26998 ||| ||||| || |||||||| | || ||||| || ||||| | || || || Sbjct 2536 TAATATTCAGAAGGAATCTACCCTTCACCTGGTGTTGCGACTTCGTGGTGGTAA 2483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478356965522560