Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1636 215 1e-50 >seq1636 Length=7642 Score = 215 bits (238), Expect = 1e-50 Identities = 616/934 (66%), Gaps = 20/934 (2%) Strand=Plus/Plus Query 363382 TATGATATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTA-TCAATGGTGA 363440 ||| || |||||| | ||| || ||||| ||||||||| ||| | | || || | Sbjct 4161 TATAATTATTTCGGCTTTAAAACTTTGGAGCGATCCTACCTG-CTCAAAATTAAGGGCAA 4219 Query 363441 TATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGA 363500 || || ||||| || ||||||||| | ||||| ||||| || ||||| || || ||| Sbjct 4220 GATCGTCGAACGTCCCCAGCATATGCTGATGCGCGTTGCCATCGGTATTCACGGCGAGGA 4279 Query 363501 TGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCAC 363560 | | ||||| || || || || || || || || | || | ||||| || || | Sbjct 4280 TATCGATGCGGCCATCGAGACGTACAATCTGCTGTCGGAGCGATTTTTCACCCATGCTTC 4339 Query 363561 GCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAA 363620 ||||| |||| ||| | || | ||| ||| | ||||| ||||| || | | Sbjct 4340 TCCAACTATGTTTGCTGCGGCGACACAACGTCCGCAGCTTTCTTCCTGCTTCCTGTTGAC 4399 Query 363621 AATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTC 363680 ||| ||||| ||| || ||||||| || || || || | || || || || || Sbjct 4400 GATGTCCGACGACAGCATTGACGGTATCTACGATACGCTGAAACAGTGCGCCCTGATATC 4459 Query 363681 CAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGCACAGAACAGTTACA 363739 ||| || || || ||||| | | || | || | | ||||| || | |||| Sbjct 4460 AAAGTCAGCCGGTGGCATTGGGCTGAACG-TGCATTGTATCCGTGCGAAGGGAACGTACA 4518 Query 363740 TTCGCGG-CACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAAT 363798 | ||||| |||| ||| ||| ||||| |||| || |||||||| |||| | || Sbjct 4519 T-CGCGGGCACAAATGGAATCTCCAATGGTTTGGTGCCGATGCTTCGCGTGTACAATAAC 4577 Query 363799 ACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTC 363858 || ||| |||||||||| || || || ||||| || || ||||| || || || Sbjct 4578 ACGGCGCGGTACGTCGATCAAGGAGGCAATAAGCGACCCGGAGCATTTGCAATCTACCTG 4637 Query 363859 GAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAG 363918 ||||| || | ||| | || |||||||| || || || ||||| || || ||| Sbjct 4638 GAGCCGTGGCACGGTGATGTGTTCGAGTTTCTCGATCTGAAAAAGAACACAGGGAAGGAG 4697 Query 363919 GAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGC 363978 || | ||||| || || |||||||||| |||||| | | || || |||||||| Sbjct 4698 GAGGTACGTGCGCGAGACATGTTCTATGCCCTTTGGATACCGGATTTATTCATGAAGCGA 4757 Query 363979 GTGGAGGCAGGTAA-GAATTGGTCACTCTTTTG--CCCACACGAATGTCCAGGTCTTTCC 364035 |||||||| ||| ||| || | |||| || ||| || || || || || | || Sbjct 4758 GTGGAGGC---TAACGAAATGTGGAGTCTTATGTGCCCGCATGATTGCCCCGGATTGTCT 4814 Query 364036 GATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCT 364095 ||| ||||| || || | | | ||||| || || || |||| | | Sbjct 4815 GATTCGTGGGGCGAAGAGTTCGAGAAACGGTACGAGGGCTACGA----GAAGGAAGGTCG 4870 Query 364096 CGTAA---GACAATTCCCG-CACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGA 364151 | | | | ||| | | | ||| | || ||||||||||| || || || ||| | || Sbjct 4871 CTTTATTCGCCAAGTAAAGGCGCAGGACCTGTGGTTTGCCATAATTGAATCACAGGTGGA 4930 Query 364152 GACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCA 364211 || || || || ||| ||||||| ||| |||| ||||| ||| ||||||||| | Sbjct 4931 AACCGGCGTGCCGTACATGCTGTACAAGGATGCGTGTAACCGAAAGAGCAACCAGCAAAA 4990 Query 364212 CCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGA 364271 | | || ||||| || ||||| || || ||||| | || ||| | | || Sbjct 4991 CGTGGGCACAATAAAGTGCTCAAACCTTTGCACGGAGATCGTGGAGTACTCTTCAAAGGA 5050 Query 364272 CGAGACTGCCGTATGTAACCTTGCGTCGATCGCG 364305 ||||| |||||| || || ||||| ||||||||| Sbjct 5051 CGAGATTGCCGTGTGCAATCTTGCATCGATCGCG 5084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302501138319536