Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq1636 150 2e-31 seq42053 149 6e-31 seq20890 141 9e-29 seq50967 129 6e-25 seq3519 102 8e-17 seq20012 98.7 9e-16 seq38620 96.9 3e-15 >seq1636 Length=7642 Score = 150 bits (166), Expect = 2e-31 Identities = 1111/1767 (63%), Gaps = 52/1767 (3%) Strand=Plus/Minus Query 144738 CCGCTGGCTTGGTGCGCAAATAGTACATGCCCGTTTTGAGTCCCGAGCGCCAAGTGTAGT 144797 |||| |||||||| ||||| ||||||||||||||||| || ||| ||| |||| Sbjct 5967 CCGCCGGCTTGGTACGCAAGTAGTACATGCCCGTTTTAAGGCCCATCTTCCAGCCGTAGA 5908 Query 144798 CGTGTATCGACGTCATCAGAGCGTACGTGGGCTCCGCCACAAACAAATTTAGCGATTGGC 144857 || ||||| |||| | | || | || || ||||| | || | ||| || Sbjct 5907 AATGGATCGATGTCAGCTTGCCATAATTCGGTTCAGCCACGTGAATGTTGAACGACTGTG 5848 Query 144858 TTTGATCAATGAAAGCGTTGCGGTCGGCGGCCATCTCAATCATACGTTTGCATTTCATTT 144917 |||||| || || || |||||||||||||||| || | ||| | || | Sbjct 5847 ATTGATCTATAAACGCTCCTCGGTCGGCGGCCATCTTGATGGAAGTTTTTACTGATATCT 5788 Query 144918 CCCAAGCGGTCTTGTACAAACGTTT--AATGTGGTCCGGAATG-CCGTCAATCGCCTGAA 144974 |||| | || ||||| || || ||| | | ||||| |||| ||| ||| | Sbjct 5787 CCCAGACCGTTTTGTA--AATGTCACGAATCTCTTGGGGAATTTCCGT-AATTTTCTGGA 5731 Query 144975 TCGACCCCTTGTGCGCAAATATGGCGTTCCGCATTTCGGACGTGT-ACAGTTTTAACTTG 145033 |||| || |||||||| | || || | ||| || ||| ||| ||| Sbjct 5730 TCGATCCGTTGTGCGCCAGAATTCGGTGTCTCATATCAT-CGTCCCACAAGCCACACTCC 5672 Query 145034 ATCAAGTCGTCAATTAAGTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGACGC 145093 ||||||| | | | | ||||| || || ||||| || || | || || || | Sbjct 5671 GTCAAGTCCTTCAGGAGATGGTGATTCACCACTTGAAATTCTCCCGACAGGACGCGCCTA 5612 Query 145094 AAATACACGTTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTC 145153 ||| ||||| || ||| | ||||| || ||||| || ||||||| ||||| ||||| Sbjct 5611 TTATAAACGTTCGATGTGTACGGTTCGAAGGACTCATTGTTGCCCAAAATTTGTGCGGTT 5552 Query 145154 GTTGCGGTGGGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCT 145213 | || || ||||| |||| || || |||||||| | ||| ||||| || || Sbjct 5551 GAAGCCGTCGGCATCGGTGCCAACAGTAGAGAATTGCGAATGCCATGCTTGGCAAT--CT 5494 Query 145214 TC-CTTTAGCGTAC-CCCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACT 145271 || |||| | | |||| | ||| || || || || || |||||| ||||||| Sbjct 5493 TCTCTTTCAATTCCGCCCAGTTCCACAGGTCCGTAGGTGTCTTGTTCCACATATCGTACT 5434 Query 145272 GCAAAATGCCCTCGCTGGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTG- 145330 |||| || |||| ||| | ||||| |||| | | ||| || || || | Sbjct 5433 GCAAGATACCCTTGCTTACCGGGCTACCTTCGTACGTCTCGTA--TGGTCC--GTCACGG 5378 Query 145331 ---GCGAGCTCGCAACTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTG 145387 || | |||||| || ||||||| || ||| | || ||||| || |||||| Sbjct 5377 GCAGCCAACTCGCAGCTAGCCTCCAAGGCACCGTAGTAGATTGTTTCAAACATTTGCTGA 5318 Query 145388 TTGAGCAGCATCGCTTCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCG 145447 ||||| || || || |||||||| || |||| ||| | ||| |||||||| Sbjct 5317 TTGAGTTTTTGGGCCTCCTCACTCTCGTATGGGTATCGCATCAGGATAAACGCATCGGCC 5258 Query 145448 AGCCCCTGTATTCCCACGCCGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCG 145507 | || || | || | |||||||||| || |||||| | |||| | Sbjct 5257 ATACCTTGCACACCAATACCGATGGGCCTGTGGCGCATGTTCGAACGACGCGCCTCCGGA 5198 Query 145508 ATAGGATATCGATTACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATG 145567 | ||||| || |||||| ||||| |||||||||||| ||| ||| | | Sbjct 5197 ACCGGATAGTAGTTGATGTCGATGATTTTGTTCAAGTTTCGCGTTACGGTCTTAGCGACA 5138 Query 145568 TGCCGCAACTTTTCAAAGTCAAAC---CGAGCC--TCGTCAACGACCACACAGCTATTGA 145622 | || || |||| || || ||| || || ||| || ||| | || | Sbjct 5137 TCTTTCAGTTTGCCAAAATCGTACGTACGATCCGATC-TCA-----CAAACA--TGTTTA 5086 Query 145623 CGGCGATCGACGCCAAATTACAAACTGCCGTCTCCTCGGCGTCG--CTGTATTGTACGAT 145680 |||||||| || | ||| || || || |||| || | | | ||| | ||||| Sbjct 5085 ACGCGATCGATGCAAGATTGCACACGGCAATCTCGTC--CTTTGAAGAGTACTCCACGAT 5028 Query 145681 CTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTT 145740 ||| | ||| | || || || || || |||| |||||||| || || || | ||| Sbjct 5027 CTCCGTGCAAAGGTTTGAGCACTTTATTGTGCCCACGTTTTGCTGGTTGCTCTTTCGGTT 4968 Query 145741 GCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGAT--A 145798 ||||| |||||||| ||||||||||| |||| || |||||||| | || | || Sbjct 4967 ACACGCATCCTTGTACAGCATGTACGGCACGCCGGTTTCCACCTGTGATTCAATTATGGC 4908 Query 145799 AAACGGTGCAAGTCCTGCGCACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTC 145858 |||| || ||||||||| || || | |||| || || | ||||| | Sbjct 4907 AAAC--CACAGGTCCTGCGCCTTTACTTGGCGAATAAAGCGACCTTCCTTCTCGTAGCCC 4850 Query 145859 CTGTAGAGCTCCTCAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGA 145918 ||| | | ||| ||| | || | |||| |||| ||||| || | | || Sbjct 4849 TCGTACCGTTTCTCGAACTCTTCGCCCCACGAATCAGACAATCCGGGGCAATCATGCGGG 4790 Query 145919 CACATCAGCGACCATACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCAC 145978 ||||| || ||| | |||| || | || |||| ||| || ||||| || | ||| Sbjct 4789 CACATAAGACTCCACATTTCGTTAGCCTCCACTCGCTTCATGAATAAATCCGGTATCCAA 4730 Query 145979 AGCGCGTACATCAAGTCGCGCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATTA 146038 || || || | || ||| ||||| ||||| || |||| |||| || Sbjct 4729 AGGGCATAGAACATGTCTCGCGCACGTACCTCCTCCTTCCCTGTGTTCTTTTTCAGATCG 4670 Query 146039 AGCACACT-ATAGATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG 146097 || | ||| | | || |||||||||| || | |||| || | ||||| ||| Sbjct 4669 AG-AAACTCGAACACATCACCGTGCCACGGCTCCAGGTAGATTGCAAATGCTCCGGGTCG 4611 Query 146098 ---TTTGCCACCCTGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTC 146154 ||||| || || || |||| || || |||| || | ||||| | ||| ||| | Sbjct 4610 CTTATTGCCTCCTTGATCGACGTACCGCGCCGTGTTATTGTACACGCGAAGCATCGGCAC 4551 Query 146155 GACGCCGCTGGCTACGCCGTTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATG 146214 | || ||| | || || || || || || | || | ||||| Sbjct 4550 CAAACCATTGGAGATTCCATTTGTGCCCGCGATGTACGTTCCCTTCGCACGGATACAATG 4491 Query 146215 AACATTCACGCCGAGACCGCCGCCGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTC 146274 || |||| || | || ||| | |||| ||||| |||||| | ||||| || Sbjct 4490 CACGTTCAGCCCAATGCCACCGGCTGACTTTGATATCAGGGCGCACTGTTTCAGCGTATC 4431 Query 146275 GTAGATGCCGTCAATGCTATCGCTTCGAATGCCG--AGCAGAAAGCACGAGCACATCTGC 146332 |||||| ||||||||||| ||| ||| | || | ||| ||||| || | | |||| Sbjct 4430 GTAGATACCGTCAATGCTGTCG--TCGGACATCGTCAACAGGAAGCAGGAAGAAAGCTGC 4373 Query 146333 GCCATCGGCGTCCCCGCCGAGAACAACGTCGGGCTCGCGTGCGT-AAACATTTTTCGGCT 146391 | | ||| |||| | |||| || || || || || ||| || || | Sbjct 4372 GGACGTTGTGTCGCCGCAGCAAACATAGTTGGAGAAGCATGGGTGAAAAATCGCTCCG-A 4314 Query 146392 CATCATCCGATACGTTTCGATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGAC 146451 || || ||||| ||||| || | | || || ||||| ||||| || | || || Sbjct 4313 CAGCAGATTGTACGTCTCGATGGCCGCATCGATATCCTCGCCGTGAATACCGATGGCAAC 4254 Query 146452 GCGCATGAGCATGTGTTGGGGCCGCTC 146478 |||||| ||||| || ||||| || || Sbjct 4253 GCGCATCAGCATATGCTGGGGACGTTC 4227 >seq42053 Length=1259 Score = 149 bits (164), Expect = 6e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || || || | |||||||||||| ||||||||||| ||| | Sbjct 1235 CCACCACGCAGACGAAGGACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAGTCGGAC 1176 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| ||| |||| ||||||||||| || || || Sbjct 1175 AGGGTGCGTCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGGA 1116 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || || | | ||| | |||||| | | ||||| Sbjct 1115 ATGCCTTCCTTGTCCTGGATCTTAGCTTTCACATTCTCGATAGTATCCGAAGGCTCGACC 1056 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || ||||| || ||||| |||||||| Sbjct 1055 TCCAGAGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 1009 >seq20890 Length=2679 Score = 141 bits (156), Expect = 9e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| |||| || ||||| | ||| | |||||||||||| |||||||||||||| Sbjct 1409 GCCACCACGCAGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGAATGTTGTAATCAGA 1468 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| |||||| ||||||||||| ||| | || | ||||||||| || || || Sbjct 1469 CAGCGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGATCTGGGGG 1528 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| || || | | ||| | ||||| | || || | Sbjct 1529 GATACCCTCCTTGTCCTGGATCTTGGCTTTCACATTCTCGATCGTATCCGAGGGTTCAAC 1588 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| ||| ||||| || || ||||| ||||| |||||||| Sbjct 1589 CTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTCACGAAGATCTGCAT 1636 >seq50967 Length=297 Score = 129 bits (142), Expect = 6e-25 Identities = 162/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || |||| ||||| ||| ||||| | ||||| || || || ||||||||||| Sbjct 79 GCCTCCTCGCAGACGCAACACCAAATGCAGAGTCGATTCTTTCTGGATGTTGTAATCCGA 138 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| || || |||||||| || ||| |||| | |||||| || || || || Sbjct 139 CAAGGTGCGACCATCTTCCAGCTGCTTTCCGGCGAAGATAAGACGCTGTTGATCTGGCGG 198 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 |||||||||||| || ||| | | || ||||| | ||| | ||||||| | ||| | Sbjct 199 GATTCCTTCTTTATC-CTGAATCTTTGCCTTGACGTTCTCGATCGTATCGGATGGCTCCA 257 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAA 131225 |||| || | ||||| ||||| |||||||| ||||| Sbjct 258 CCTCGAGAGTGATCGTTTTGCCGGTCAGAGTTTTGACGAA 297 >seq3519 Length=1813 Score = 102 bits (112), Expect = 8e-17 Identities = 126/170 (74%), Gaps = 2/170 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || |||||||||| ||| ||||| | ||||| || || || ||||||||||| | Sbjct 1619 CCTCCTCGCAAACGCAACACCAAATGCAGAGTCGATTCTTTCTGGATGTTGTAATCCGAC 1678 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || |||||||| || ||| |||| | |||||| || || || ||| Sbjct 1679 AAGGTGCGACCATCTTCCAGCTGCTTTCCGGCGAAGATAAGACGCTGTTGATCTGGCGGG 1738 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGG 131176 |||||||| || || ||| | | || ||||| | ||| | ||||||| Sbjct 1739 ATTCCTTCCTTATC-CTGAATCTTTGCCTTGACGTTCTCGATCGTATCGG 1787 >seq20012 Length=3655 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | |||| ||| | || | ||| || ||||| ||||| || || || | Sbjct 2486 CCACCACGAAGTCGCAACACCAGGTGAAGGGTAGATTCCTTCTGAATATTATAGTCAGAC 2545 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| ||||| ||||| ||| |||| | ||||||||| || || || Sbjct 2546 AACGTACGACCATCCTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGATCTGGTGGA 2605 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || |||||||| || ||| || ||| | | || | || || | || ||||| Sbjct 2606 ATACCTTCTTTATCCTGGATCTTTGCCTTCACATTTTCGATGGTGTCAGAGGGCTCGACC 2665 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || || || || ||||| |||||||||||||| Sbjct 2666 TCGAGAGTTATGGTCTTCCCAGTGAGCGTTTTGACGAAAATCTGCAT 2712 >seq38620 Length=1898 Score = 96.9 bits (106), Expect = 3e-15 Identities = 173/250 (69%), Gaps = 2/250 (1%) Strand=Plus/Minus Query 46063 CTGCTTAATGCGTTTGA-ACGTATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAA 46121 ||| |||| ||| | || ||| | ||||||||| ||||| |||| ||||| |||| Sbjct 282 CTGTTTAACGCGATCGAGACGC-TACCGTGCGTGAAAAAGAAGGCCGATTGGGCTCTGAA 224 Query 46122 GTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGA 46181 |||||| |||| | || | || | || || | || ||||| || ||||| Sbjct 223 CTGGATCTCAAGCAAGAAGGCCAACTTTGGTGAACGGGTTGTTGCCTTCGCTGCCGTGGA 164 Query 46182 GGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCAT 46241 ||| ||||||| || |||||||| ||||| || | | || | ||| | || Sbjct 163 GGGTATCTTTTTCAGCGGTAGTTTTGCGGCCATTTTCTGGCTTAAGAAGCGCGGCTTGAT 104 Query 46242 GCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTT 46301 ||| || || ||||| ||||||||||| ||||||||||| || ||||| ||||| Sbjct 103 GCCAGGACTCACGTTCTCGAACGAGCTGATCTCGCGCGACGAAGGACTGCACTGCGACTT 44 Query 46302 TGCGTGTCTC 46311 ||| |||||| Sbjct 43 TGCCTGTCTC 34 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471711608632320