Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq38620 138 1e-27 seq40995 111 2e-19 seq49049 82.4 8e-11 >seq38620 Length=1898 Score = 138 bits (152), Expect = 1e-27 Identities = 187/261 (72%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 93077 TAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCA 93136 || ||| |||| | || ||||||||| || | |||||||| || || |||| ||| Sbjct 23 TATTTGAACATGAGACAGGCAAAGTCGCAGTGCAGTCCTTCGTCGCGCGAGATCAGCTCG 82 Query 93137 TTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAA 93196 || ||| || | ||||| | || || || ||||| ||||| || || | |||||| Sbjct 83 TTCGAGAACGTGAGTCCTGGCATCAAGCCGCGCTTCTTAAGCCAGAAAATGGCCGCAAAA 142 Query 93197 CTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTT 93256 ||||| ||||| ||||| |||||||| || || || |||| ||||| |||| || Sbjct 143 CTACCGCTGAAAAAGATACCCTCCACGGCAGCGAAGGCAACAACCCGTTCACCAAAGTTG 202 Query 93257 GCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGT 93316 || || || |||||| || | |||||||||||| || || || | || ||||| Sbjct 203 GCCTTCTTGCTTGAGATCCAGTTCAGAGCCCAATCGGCCTTCTTTTTCACGCACGGTAGC 262 Query 93317 GTTTCGATAGCGTTAAATAGG 93337 || ||||| |||||||| ||| Sbjct 263 GTCTCGATCGCGTTAAACAGG 283 >seq40995 Length=942 Score = 111 bits (122), Expect = 2e-19 Identities = 76/85 (89%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||| |||||||| |||||||||||||||||||||| |||||||||| |||||| Sbjct 240 AGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGTAAGGGAGC 181 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||| |||||| Sbjct 180 GTGGGTTCGAACCCCACTTCTGACA 156 >seq49049 Length=500 Score = 82.4 bits (90), Expect = 8e-11 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||| |||||||| |||||||||||||||||||||| |||||||||| |||||| Sbjct 437 AGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGTAAGGGAGC 496 Query 126323 GTGG 126326 |||| Sbjct 497 GTGG 500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556505467123520