Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1636 275 5e-69 seq50967 141 8e-29 seq3519 131 1e-25 seq20890 122 7e-23 seq20012 116 3e-21 seq42053 100 2e-16 >seq1636 Length=7642 Score = 275 bits (304), Expect = 5e-69 Identities = 1045/1614 (65%), Gaps = 42/1614 (3%) Strand=Plus/Minus Query 128775 CGACTTGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACAT 128834 ||| |||||||| || || | ||| |||| | ||||||||||| ||||| |||||||| Sbjct 5999 CGATTTGTCCACCGTGAACTGAATGGCGTTTACCGCCGGCTTGGTACGCAAGTAGTACAT 5940 Query 128835 GCCTGTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGGT 128894 ||| ||||| | || | ||||| || | || |||| |||| | | || | Sbjct 5939 GCCCGTTTTAAGGCCCATCTTCCAGCCGTAGAAATGGATCGATGTCAGCTTGCCATAATT 5880 Query 128895 GGGTTGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGC 128954 |||| | || ||| || || || || |||||| ||||| | || || ||||| Sbjct 5879 CGGTTCAGCCACGTGAATGTTGAACGACTGTGATTGATCTATAAACGCTCCTCGGTCGGC 5820 Query 128955 AGCCATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTCTCAC 129014 ||||| || || |||| ||| || ||||| ||||||||||||| || | | Sbjct 5819 GGCCATCTTGATGGAAGTTTTTACTGATATCTCCCAGACCGTTTTGTAAATGTCACGAAT 5760 Query 129015 GTGTTTTGGTATTTCTTCAATGTTCTGCA-CGCTGCCGTTGTTTGCAATAATTTTGTTTC 129073 | || || ||||| ||| ||||| | || | ||||||| || | |||| || || Sbjct 5759 CTCTTGGGGAATTTCCGTAATTTTCTGGATCGAT-CCGTTGTGCGCCAGAATTCGGTGTC 5701 Query 129074 GCATCTGTTCGTTGTACAA-ATTCAGTTTGATCAAATCGTCGGTCAAGTATTTGTTTATT 129132 ||| | |||| |||| || | | |||| ||| || || | || | ||| Sbjct 5700 TCATATCATCGTCCCACAAGCCACACTCCG-TCAA---GTCCTTC-AGGAGATGGTGATT 5646 Query 129133 ----ACTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTC 129188 |||||||| || |||| || ||||||| | |||| ||| ||| |||| || Sbjct 5645 CACCACTTGAAATTCTCCCGACAGGACGCGCCTATTATAAACGTTCGATGTGTACGGTTC 5586 Query 129189 AAACGATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGCCACGCA 129248 || || ||||||||||| || ||||| || |||| || || ||||| |||| Sbjct 5585 GAAGGACTCATTGTTGCCCAAAATTTGTGCGGTTGAAGCCGTCGGCATCGGTGCCAACAG 5526 Query 129249 AAGCGAGTTTCGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGTCCAGTCCCACAT 129308 || || || || | || |||| ||| | | ||| |||| | ||||| ||||| Sbjct 5525 TAGAGAATTGCGAATGCCATGCTTGGCAATCTTCTCTTTCAATTCCGCCCAGTTCCACAG 5466 Query 129309 CGATGTGGGTGTGTGATTCCACAAGTCGTATTGCAATATACCCAAACTGGCGGGACTGGA 129368 || ||||| | ||||||| ||||| ||||| |||||| || | || || Sbjct 5465 GTCCGTAGGTGTCTTGTTCCACATATCGTACTGCAAGATACCCTTGCTTACCGGGCTACC 5406 Query 129369 AAAGTAGGAATCGTGCACGCCGTAAGCTTTTGCCAATTCGCAACTCGCTTCCAATGCGCC 129428 ||| | |||| |||| | ||||| ||||| || || ||||| || || Sbjct 5405 TTCGTACGTCTCGTATGGTCCGTCACGGGCAGCCAACTCGCAGCTAGCCTCCAAGGCACC 5346 Query 129429 AAAATAAATTGTTTCGGCAATTTTGGTG-TTCAACACTTTGGCCTGGTCGCTTTCGTACG 129487 | || |||||||| | |||| || || | || ||||| || || ||||| | Sbjct 5345 GTAGTAGATTGTTTC-AAACATTTGCTGATTGAGTTTTTGGGCCTCCTCACTCTCGTATG 5287 Query 129488 GCATACGCAACATGGCAAATGTGTCGGCCAAACCTTGAATACCCACACCGATGGGTCGAT 129547 | |||| || | ||| | ||||||| |||||| | ||| | ||||||||| | | Sbjct 5286 GGTATCGCATCAGGATAAACGCATCGGCCATACCTTGCACACCAATACCGATGGGCCTGT 5227 Query 129548 GTTTTCTATTGGATTTTTGTGCCGACAACAAGGGATAGTAGTTGATGTCTATAATTTTGT 129607 | | || || | ||| | | ||||||||||||||||| || ||||||| Sbjct 5226 GGCGCATGTTCGAACGACGCGCCTCCGGAACCGGATAGTAGTTGATGTCGATGATTTTGT 5167 Query 129608 TTAAATTCTTGACCACAATTTTCGTTACGTATTTTAACATTTCAAAATTGTACTCGCCTA 129667 | || || || | || | || | ||| | | |||||| ||| | || Sbjct 5166 TCAAGTTTCGCGTTACGGTCTTAGCGACATCTTTCAGTTTGCCAAAATCGTA----CGTA 5111 Query 129668 C-AT-CGATGTCGACAAA-TTGATTGACACAAATCGAGGCCAAATTGCAGACGGCACTTT 129724 | || |||| || ||||| || || || | ||||| || | |||||| |||||| | | Sbjct 5110 CGATCCGATCTC-ACAAACATGTTTAACGC-GATCGATGCAAGATTGCACACGGCAATCT 5053 Query 129725 CGTTTTTGTCACTGTACTCGACAATTTCGGCGCACAAATT--ACTATTTTTAATGGTGCC 129782 ||| || | |||||| || || || | ||| | || | | ||| || ||||| Sbjct 5052 CGTCCTTTGAAGAGTACTCCACGATCTCCGTGCAAAGGTTTGAGCACTTT--ATTGTGCC 4995 Query 129783 CAAATGCTTTTGATTACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTGCC 129842 || | | || || || || ||| || ||||| ||||||| |||||||||| ||| Sbjct 4994 CACGTTTTGCTGGTTGCTCTTTCGGTTACACGCATCCTTGTACAGCATGTACGGCACGCC 4935 Query 129843 CGTTTCGACTTGCGTTTCGACAATGGTCCTGAACAAGTCTCGAGCCTTGATCTGTCTTAC 129902 ||||| || || | ||| | |||| ||| ||| | ||||| | || | | Sbjct 4934 GGTTTCCACCTGTGATTCAATTATGGCAAACCACAGGTCCTGCGCCTTTACTTGGCGAAT 4875 Query 129903 AAATTTGCCACAT---TTCTCGTATGCCACATACAGTTGTTCAAATTCTGAGCCGTGTAC 129959 ||| || || | |||||||| || | ||| ||| || || ||| ||| || Sbjct 4874 AAA---GCGACCTTCCTTCTCGTAGCCCTCGTACCGTTTCTCGAACTCTTCGCC--CCAC 4820 Query 129960 GGTGTCGAGCAA--CGGCG-ATTCACGCGGACACATCAAACTCCACATTCCATCCGCTTC 130016 | || ||| ||| | | ||| |||| ||||| | |||||||||| | | || || Sbjct 4819 -GAATCAGACAATCCGGGGCAATCATGCGGGCACATAAGACTCCACATTTCGTTAGCCTC 4761 Query 130017 GACTCGTTTCATAAACAAATCGGGTACCCACAGGGCGTACAACAAATCTCGCGCTTTTCT 130076 ||||| ||||| || ||||| |||| ||| ||||| || |||| |||||||| | Sbjct 4760 CACTCGCTTCATGAATAAATCCGGTATCCAAAGGGCATAGAACATGTCTCGCGCACGTAC 4701 Query 130077 ATCCTCGGCACCCATGTTACGTTTCAGTTCAAGGAAATCGTAAATGTCGGCGTGCCACGG 130136 ||||| || |||| |||||| || || || ||| | | || |||||||||| Sbjct 4700 CTCCTCCTTCCCTGTGTTCTTTTTCAGATCGAGAAACTCGAACACATCACCGTGCCACGG 4641 Query 130137 TTCAACATAAATTGCCATTGCGCCCTTCCG---TTTGCCCCCTTGGTCAACGTGGCGCAC 130193 || | || ||||| | ||| || || ||||| ||||| || |||| ||| | Sbjct 4640 CTCCAGGTAGATTGCAAATGCTCCGGGTCGCTTATTGCCTCCTTGATCGACGTACCGCGC 4581 Query 130194 GGCATTGTTGTAGACTCGCAACATTGCCTCCAATCCGTTGGCCGTGCCGTTTGTGCTCTC 130253 | || ||||| || || | ||| | | |||| || |||| | || ||||||| | | Sbjct 4580 CGTGTTATTGTACACGCGAAGCATCGGCACCAAACCATTGGAGATTCCATTTGTGCCCGC 4521 Query 130254 AATGAAACTGCCACGAGCCCGAACGTTATGAACGCTTAGACCTATGCCGCCGCCAAATTT 130313 ||| | | || || || | ||| ||| | || || ||||| ||| | | || Sbjct 4520 GATGTACGTTCCCTTCGCACGGATACAATGCACGTTCAGCCCAATGCCACCGGCTGACTT 4461 Query 130314 TGATATCAACGCGCAATCGCGTAGCGTTTCATAAATGCCAACGATACTGTCTTC 130367 |||||||| ||||| | ||||| || || || || | || ||||| || Sbjct 4460 TGATATCAGGGCGCACTGTTTCAGCGTATCGTAGATACCGTCAATGCTGTCGTC 4407 >seq50967 Length=297 Score = 141 bits (156), Expect = 8e-29 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 22228 TTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTG 22287 || || |||||| | ||||| |||||| ||||||| || ||||| | ||||||| | Sbjct 297 TTCGTCAAAACTCTGACCGGCAAAACGATCACTCTCGAGGTGGAGCCATCCGATACGATC 238 Query 22288 GACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTT 22347 || | |||| ||| ||||| || || || || || || || |||||||| |||||| Sbjct 237 GAGAACGTCAAGGCAAAGATTCAGGATAAAGAAGGAATCCCGCCAGATCAACAGCGTCTT 178 Query 22348 ATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAA 22407 || || ||||| || ||| | || ||| |||||| | || ||||||||||| || ||| Sbjct 177 ATCTTCGCCGGAAAGCAGCTGGAAGATGGTCGCACCTTGTCGGATTACAACATCCAGAAA 118 Query 22408 GAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||| || | ||||| || ||||| |||| ||||| Sbjct 117 GAATCGACTCTGCATTTGGTGTTGCGTCTGCGAGGAGG 80 >seq3519 Length=1813 Score = 131 bits (144), Expect = 1e-25 Identities = 146/195 (75%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 22251 AACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCA 22310 |||| ||||||| || ||||| | ||||||| | || | |||| ||| ||||| Sbjct 1813 AACGATCACTCTCGAGGTGGAGCCATCCGATACGATCGAGAACGTCAAGGCAAAGATTCA 1754 Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370 || ||||| || || || || |||||||| |||||||| || ||||| || ||| | || Sbjct 1753 GGATAAGGAAGGAATCCCGCCAGATCAACAGCGTCTTATCTTCGCCGGAAAGCAGCTGGA 1694 Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTT 22430 ||| |||||| | || ||||||||||| || |||||||| || | ||||| || || Sbjct 1693 AGATGGTCGCACCTTGTCGGATTACAACATCCAGAAAGAATCGACTCTGCATTTGGTGTT 1634 Query 22431 GCGATTGCGCGGAGG 22445 ||| ||||| ||||| Sbjct 1633 GCGTTTGCGAGGAGG 1619 >seq20890 Length=2679 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| || || || ||||| | || ||||| || | || ||||| || ||| || Sbjct 1639 AAGATGCAGATCTTCGTGAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTTGAACCC 1580 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||||| | || || | ||| || || || |||||||||||||| || || ||| Sbjct 1579 TCGGATACGATCGAGAATGTGAAAGCCAAGATCCAGGACAAGGAGGGTATCCCCCCAGAT 1520 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || ||||| || || |||||||| ||| | ||||| ||||| | || |||||| Sbjct 1519 CAGCAGCGTCTGATTTTCGCCGGCAAGCAGCTGGAGGACGGACGCACGCTGTCTGATTAC 1460 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||||| || || || ||| | ||| | || | || |||| || || Sbjct 1459 AACATTCAGAAGGAGTCGACCCTTCATCTGGTGCTTCGCCTGCGTGGTGG 1410 >seq20012 Length=3655 Score = 116 bits (128), Expect = 3e-21 Identities = 165/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||||||||| ||||| || ||||| | || || || || | ||||| || || || | Sbjct 2716 AAAGATGCAGATTTTCGTCAAAACGCTCACTGGGAAGACCATAACTCTCGAGGTCGAGCC 2657 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | | || ||| | || || | || ||| || || || || || ||||||||||| || Sbjct 2656 CTCTGACACCATCGAAAATGTGAAGGCAAAGATCCAGGATAAAGAAGGTATTCCACCAGA 2597 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 ||| || ||||| || || |||||||||||| | |||||| || || | || || || Sbjct 2596 TCAGCAGCGTCTGATCTTCGCCGGCAAACAGCTGGAGGATGGTCGTACGTTGTCTGACTA 2537 Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| || ||||| ||| | || | || |||||| | || || ||| Sbjct 2536 TAATATTCAGAAGGAATCTACCCTTCACCTGGTGTTGCGACTTCGTGGTGGT 2485 >seq42053 Length=1259 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | || || || || ||||||| || || || | | Sbjct 1009 ATGCAGATCTTCGTGAAGACTCTGACTGGCAAGACCATCACTCTGGAGGTCGAGCCTTCG 1068 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| || || || |||||||| || ||||| || ||||| Sbjct 1069 GATACTATCGAGAATGTGAAAGCTAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAG 1128 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || || || ||||| ||| | ||||| |||||| | ||||| |||||| Sbjct 1129 CAGCGTTTGATCTTCGCTGGCAAGCAGCTTGAGGACGGACGCACCCTGTCCGACTACAAC 1188 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || || ||| | || || || | || |||| || ||| Sbjct 1189 ATTCAGAAGGAGTCGACCTTGCACTTGGTCCTTCGTCTGCGTGGTGGT 1236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419466867274120