Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq609 168 1e-36 seq50967 154 3e-32 seq3519 140 6e-28 seq20012 136 7e-27 seq20890 131 3e-25 seq42053 125 1e-23 seq41025 104 4e-17 >seq609 Length=4955 Score = 168 bits (186), Expect = 1e-36 Identities = 360/536 (67%), Gaps = 4/536 (1%) Strand=Plus/Minus Query 268258 CCACATTGCTTCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCC 268317 |||||| ||||| || ||||| || |||||||| || ||||||| ||| | || || Sbjct 2143 CCACATGGCTTCCACGTAGTCTTTGGCGTGGCCCCAGTCTCGCTTTGAGTCGAGATTACC 2084 Query 268318 GAGGAACAGGCATTTCTGCTTGCCGAGCTTCACGCGTGCAAGACCG--CGAGTGATTTTT 268375 | ||||||| | ||| |||||| | | | | |||| |||||||| ||| Sbjct 2083 TAATTCAAGGCATTCCAGCTGGCCGAG--TGAGATTTTCGCCACCGAACGAGTGATCTTT 2026 Query 268376 CGGGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCAC 268435 || ||||| || |||| || || | || |||||||||||| || || |||||||| Sbjct 2025 CGTGTCACAAAATTCTCTCCCCGGCGCGGTGACTCGTGGTTGAATAGAATCCCGTTGCAG 1966 Query 268436 GCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACATCTTTGCA 268495 |||||||| | || ||||| |||||||| | || |||||||| | ||||||| || Sbjct 1965 GCGAACATATCGTAGGCCTCGCGGTAGTTTATCACGATCCAGTATCCGTACATCTTCGCG 1906 Query 268496 ACTGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATTTCTCGGACT 268555 || || || ||||| |||| ||| || ||| | ||||| || |||| || Sbjct 1905 CAAGCATATGGCGAACGCGGATAGAACGGTGTCTTTTCGTTTTGTGGCGTTTCAGCCACC 1846 Query 268556 TTGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTTTTTTCGAGACCGCAG 268615 || || | |||||||| ||||| || |||||||| | |||||| | || Sbjct 1845 TTACCGTACAGCTCGGACGTCGAGGCCTGGTAGAAGCGGACAGATTTTTCCTGCCCCACC 1786 Query 268616 ATTCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGCTGTATACTCC 268675 | ||||| || || || | || || || |||| | || || || || || || || Sbjct 1785 GTGCGGATGGCATCTAGAAGTCGTAGCGTGCCCACCGCGTCTACCTCAGCCGTGTATTCG 1726 Query 268676 GGCATCTCGAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTATAAACCTCATCCGGT 268735 || || || || | || ||| ||||| || ||| ||||||| ||||| || ||| Sbjct 1725 CTCAGGTCAAACGAAATCTTGACGTGGCTTTGCGCGGCCAGGTTGTAAACTTCGGACGGG 1666 Query 268736 TTGACCTGCTGCACGATCTTCACGAGGTTCGTTGAGTCGGTGAGGTCTCCGTAGTG 268791 || || | ||||||||| ||| | |||||| | ||| ||||| || Sbjct 1665 CGCACTTGGGCTATGATCTTCACCAGGGCACTGCTGTCGGTCATGTCACCGTAATG 1610 >seq50967 Length=297 Score = 154 bits (170), Expect = 3e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || || ||||| ||||| || || || || ||||| |||||||| ||||| || Sbjct 80 CCTCCTCGCAGACGCAACACCAAATGCAGAGTCGATTCTTTCTGGATGTTGTAATCCGAC 139 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| | |||||| |||||||| || || | ||||| || || || Sbjct 140 AAGGTGCGACCATCTTCCAGCTGCTTTCCGGCGAAGATAAGACGCTGTTGATCTGGCGGG 199 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||| || || |||||||||||||||||| |||||| || || | || || || Sbjct 200 ATTCCTTCTTTATCCTGAATCTTTGCCTTGACGTTCTCGATCGTATCGGATGGCTCCACC 259 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || | ||||| ||||| || || || || |||||||| Sbjct 260 TCGAGAGTGATCGTTTTGCCGGTCAGAGTTTTGACGAA 297 >seq3519 Length=1813 Score = 140 bits (154), Expect = 6e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| || | ||||| ||||| || || || || ||||| |||||||| ||||| | Sbjct 1617 TTCCTCCTCGCAAACGCAACACCAAATGCAGAGTCGATTCTTTCTGGATGTTGTAATCCG 1676 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | | || | |||||||| | |||||| |||||||| || || | ||||| || || | Sbjct 1677 ACAAGGTGCGACCATCTTCCAGCTGCTTTCCGGCGAAGATAAGACGCTGTTGATCTGGCG 1736 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | || |||||||| || |||||||||||||||||| |||||| || || | || || | Sbjct 1737 GGATTCCTTCCTTATCCTGAATCTTTGCCTTGACGTTCTCGATCGTATCGGATGGCTCCA 1796 Query 68413 CTTCCAAGGTGATGGTT 68429 | || | ||||| ||| Sbjct 1797 CCTCGAGAGTGATCGTT 1813 >seq20012 Length=3655 Score = 136 bits (150), Expect = 7e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 68232 TTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCG 68291 || || || ||||| ||||| |||| ||| || || || || || || || ||||| || Sbjct 2483 TTACCACCACGAAGTCGCAACACCAGGTGAAGGGTAGATTCCTTCTGAATATTATAGTCA 2542 Query 68292 GAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGT 68351 || | || | ||||| || | ||| || |||||||| || || | || || || ||| Sbjct 2543 GACAACGTACGACCATCCTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGATCTGGT 2602 Query 68352 GGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCT 68411 ||||| ||||| || || || ||||||||||| || ||||||||||| | | || Sbjct 2603 GGAATACCTTCTTTATCCTGGATCTTTGCCTTCACATTTTCGATGGTGTCAGAGGGCTCG 2662 Query 68412 ACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || | || ||||| || || ||||| || |||||||| |||||||| Sbjct 2663 ACCTCGAGAGTTATGGTCTTCCCAGTGAGCGTTTTGACGAAAATCTGCAT 2712 >seq20890 Length=2679 Score = 131 bits (144), Expect = 3e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||| || || || ||||| || || ||||| ||||| || Sbjct 1410 CCACCACGCAGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGAATGTTGTAATCAGAC 1469 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || || | || || || || || Sbjct 1470 AGCGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGATCTGGGGGG 1529 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| || || || |||||| || || | | ||| || Sbjct 1530 ATACCCTCCTTGTCCTGGATCTTGGCTTTCACATTCTCGATCGTATCCGAGGGTTCAACC 1589 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||| ||||| || ||||||||||| || ||||| |||||||| Sbjct 1590 TCAAGGGTAATGGTCTTACCCGTGAGGGTTTTCACGAAGATCTGCAT 1636 >seq42053 Length=1259 Score = 125 bits (138), Expect = 1e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||||||| | || ||||| || || ||||| || ||||| Sbjct 1235 CCACCACGCAGACGAAGGACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAGTCGGAC 1176 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || ||||| || | | || || || || ||| Sbjct 1175 AGGGTGCGTCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGGA 1116 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| || ||||| || || || |||||| || || | | || || Sbjct 1115 ATGCCTTCCTTGTCCTGGATCTTAGCTTTCACATTCTCGATAGTATCCGAAGGCTCGACC 1056 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| |||||||| || || || || ||||| ||||| |||||||| Sbjct 1055 TCCAGAGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 1009 >seq41025 Length=2165 Score = 104 bits (114), Expect = 4e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 68327 GAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGAC 68386 ||| || || | ||||| || ||||| || |||||||| || ||||||||||||||||| Sbjct 1 GAAGATAAGACGCTGTTGATCTGGTGGGATTCCTTCCTTATCCTGAATCTTTGCCTTGAC 60 Query 68387 GGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTT 68446 | |||||| || || | || ||| || || | ||||| || ||||| || || || || Sbjct 61 GTTCTCGATCGTATCGGATGGTTCCACCTCGAGAGTGATCGTCTTTCCGGTCAGAGTTTT 120 Query 68447 GACGAATATCTGCAT 68461 |||||| || ||||| Sbjct 121 GACGAAGATTTGCAT 135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921034312746560