Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq16306 93.3 1e-15 seq36679 80.6 7e-12 >seq16306 Length=2033 Score = 93.3 bits (102), Expect = 1e-15 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 3367 TGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATC 3426 ||||| || ||||| |||||||| || || | || | || | ||| || || ||| | Sbjct 411 TGTACCTTCCACAAGTACGGTCCGTCCGGAAGCGTGCAGAAGTTCGACGGTCTGTGCGTG 470 Query 3427 CTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTCTACGTG 3486 || ||| |||| | |||||||||||||||||| | ||||| |||||||||||| | || Sbjct 471 CTGCCGCTGAACATCGTCAACGAGAAGATCTACGTGTTCCTGTGGTTCTGGTTCATCCTG 530 Query 3487 CTAGCCATCATCAGCGGTATC 3507 || | ||| | | ||| ||| Sbjct 531 CTCACGATCCTGACCGGCATC 551 >seq36679 Length=1209 Score = 80.6 bits (88), Expect = 7e-12 Identities = 93/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 2675 CCGTGAAGGGCTTAATAAAGCTTCCAACAG-TCTCCATCGACAATGTATTCTTCCGGTTG 2733 |||||||||| | | ||||| | ||| | | ||||||||| |||||||| || Sbjct 269 CCGTGAAGGGTCTGCTGAAGCTAG-ACCAGGTGTGCATCGACAACAACATCTTCCGGCTG 211 Query 2734 CATTACCAGTTCACCGTGATCATCCTCATCGCGTTTTCATTGCTGGTGACTTCGCGGCAG 2793 || ||| || || ||||||||||| ||||||||||| ||||||| || ||||| ||| Sbjct 210 CACTACAAGGCGACGGTGATCATCCTGATCGCGTTTTCGCTGCTGGTCACCTCGCGCCAG 151 Query 2794 TAC 2796 ||| Sbjct 150 TAC 148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12473031948000