Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq38620 129 1e-24 >seq38620 Length=1898 Score = 129 bits (142), Expect = 1e-24 Identities = 185/257 (72%), Gaps = 4/257 (2%) Strand=Plus/Minus Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668 ||||| || || || |||||| | || ||| | || |||||||| || ||||| || ||| Sbjct 282 CTGTTTAACGCGATCGAGACGCTACCGTGCGTGAAAAAGAAGGCCGATTGGGCTCTGAAC 223 Query 42669 TGGATCGAGAGTCCCGACG--CAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCG 42726 |||||| || | || | |||| || || || || | || ||||| | ||||| | Sbjct 222 TGGATCTCAAG-CAAGAAGGCCAACTTT-GGTGAACGGGTTGTTGCCTTCGCTGCCGTGG 165 Query 42727 AGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGA 42786 |||| ||||| ||| || || || |||| |||||||| ||| || | | || Sbjct 164 AGGGTATCTTTTTCAGCGGTAGTTTTGCGGCCATTTTCTGGCTTAAGAAGCGCGGCTTGA 105 Query 42787 TGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACT 42846 |||| |||||||| ||||||||||| || ||| | ||||| || ||||| | |||| Sbjct 104 TGCCAGGACTCACGTTCTCGAACGAGCTGATCTCGCGCGACGAAGGACTGCACTGCGACT 45 Query 42847 TTGCCTGCCTCCTGTTC 42863 ||||||| ||| ||||| Sbjct 44 TTGCCTGTCTCATGTTC 28 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943736617156480