Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22]
51,048 sequences; 98,320,046 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq2949 100 2e-16
seq20890 96.9 3e-15
>seq2949
Length=10021
Score = 100 bits (110), Expect = 2e-16
Identities = 218/323 (67%), Gaps = 14/323 (4%)
Strand=Plus/Minus
Query 37813 TTGAAAACGCCGACACGCACGATCTCTTGTGGAACGCGGCTCAAATTCAGCTTGTGCGCG 37872
|||||| ||| | || ||||| |||||||||| ||||||| | ||| | || |
Sbjct 9247 TTGAAACGGCCAAAACACACGACGACTTGTGGAACTCGGCTCAGCTACAGATGGTAAAGG 9188
Query 37873 AGGGTAAGATGCATCAGTATATGCGCATGTATTGGTGCAAGAAAATTTTGGAATGGTCTG 37932
| || || ||||| | |||| ||||| ||| |||||||| | |||||| |
Sbjct 9187 AAGGCAAAATGCACGGCTTCCTGCGAATGTACTGGGCGAAGAAAATCCTCGAATGGACCA 9128
Query 37933 ATGATGCTCAGACCGCGCTCAACTACGCCATTTATCTCAATGATAAGTACAGCTTGGACG 37992
| || | |||||| | | ||||| ||||| || || |||||| | || |
Sbjct 9127 AAACGCCTGAAGAGGCGCTCGAATCAGCCATCTATCTGAACGACCGGTACAGTCTCGATG 9068
Query 37993 GGCGTGATCCCAACGGTTACGTCGGCTGTTTGTGGTCTATATGCGGGC-TACACGATAGA 38051
| || ||||| ||||| ||||| |||||| ||||||| || ||||| | || |||
Sbjct 9067 GACGCGATCCAAACGGGTACGTTGGCTGTATGTGGTCGATC-GCGGGTATCCATGATCAG 9009
Query 38052 GCCTGG------CGCGAGATTCCCATTTACGGCAAGATTCGGTACATGAACTACAACGGA 38105
| |||| ||||| || |||| || |||||||| |||||||||||| | ||
Sbjct 9008 GGCTGGAAAGAGCGCGATAT----ATTT--GGAAAGATTCGATACATGAACTACGAAGGC 8955
Query 38106 TGTGTTAGGAAGTTTAATGTTAA 38128
|| || || || ||||||||
Sbjct 8954 TGCAAAAGAAAATTCAATGTTAA 8932
>seq20890
Length=2679
Score = 96.9 bits (106), Expect = 3e-15
Identities = 89/113 (79%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| || | ||| || |||||||||||||| || ||||||||||||||||||||| | |
Sbjct 1410 CCACCACGCAGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGAATGTTGTAATCAGAC 1469
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013
| || |||| |||| ||||||||||| || ||||| |||||||||||
Sbjct 1470 AGCGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGATC 1522
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396815368620496
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |