Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq15035 95.1 9e-15 >seq15035 Length=6995 Score = 95.1 bits (104), Expect = 9e-15 Identities = 106/139 (76%), Gaps = 2/139 (1%) Strand=Plus/Minus Query 108430 TGCTTCTCGGTGGCAGGACAGAACACCATCCCGCAGTGGGTGCTCGATCACAGGGTTCAC 108489 |||| |||| | || || |||||||| ||| | ||||||| |||||| | | ||| Sbjct 3825 TGCTACTCGATCGCCGGCCAGAACACGATCTACGATTGGGTGCGGGATCACCGCATCCAC 3766 Query 108490 CACAAGTACTCTGACACG-ACGGCCGACCCACACAACGCCAACAGGGGGTTCTGGTTCTC 108548 ||||||||||| || ||| |||| || ||||||||||| ||| |||| ||| || | | Sbjct 3765 CACAAGTACTCGGAAACGGACGGT-GATCCACACAACGCGAACCGGGGCTTCCTGTACGC 3707 Query 108549 GCACGTGGGATGGCTCATG 108567 |||||| || ||||| ||| Sbjct 3706 GCACGTCGGCTGGCTGATG 3688 Score = 84.2 bits (92), Expect = 2e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 108883 GCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCC 108942 ||| | |||||||||||||||||||| |||||||||||||| | ||||||||||| || Sbjct 2229 GCTATGGGCGAGGGATGGCACAACTATCACCACGTGTTCCCGTGGGACTACAAGGCGGCT 2170 Query 108943 GAGTTGGGGAA 108953 ||| |||| || Sbjct 2169 GAGCTGGGCAA 2159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381535281006912