Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1636 347 1e-90 seq38620 105 7e-18 seq20012 104 2e-17 seq50967 96.9 3e-15 seq42053 89.7 5e-13 >seq1636 Length=7642 Score = 347 bits (384), Expect = 1e-90 Identities = 1158/1773 (65%), Gaps = 54/1773 (3%) Strand=Plus/Minus Query 152710 CCGCAGGCTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCGCAGCG-CCACGAGTAA 152768 |||| ||||| || ||||| || |||||||||||||| ||||| || | ||| ||| Sbjct 5967 CCGCCGGCTTGGTACGCAAGTAGTACATGCCCGTTTTAAGGCC-CATCTTCCAGCCGTAG 5909 Query 152769 TTGTGAATCGAAGTCATCACAGCGTACGTCGGTTGCGCCACGAACAGATTAAACGATTGG 152828 || ||||| |||| | | || |||||| |||||| | || ||||| || Sbjct 5908 AAATGGATCGATGTCAGCTTGCCATAATTCGGTTCAGCCACGTGAATGTTGAACGACTGT 5849 Query 152829 CTCTGATCTATGAAAGCGTTACGGTCGGCCGCCATCTCAATCATGC--GTTTTGCCTTC- 152885 |||||||| || || |||||||| ||||||| | ||| ||||| || Sbjct 5848 GATTGATCTATAAACGCTCCTCGGTCGGCGGCCATCT---TGATGGAAGTTTTTACTGAT 5792 Query 152886 ATCTCCCAGGCGGTTTTGTACAAATTTTTAACG---CTATCCGGTA--TACCTTCAATGT 152940 ||||||||| | |||||||| | | | ||| || | || | | || | ||| | Sbjct 5791 ATCTCCCAGACCGTTTTGTAAA----TGTCACGAATCTCTTGGGGAATTTCCGT-AATTT 5737 Query 152941 TCTGAATAGAGCCCTTGTGTGCAAAAATA--GCGTTTCGTATT-TCGGGCGTGTA--CAC 152995 |||| || || || ||||| || | ||| | || || ||| ||| | | ||| Sbjct 5736 TCTGGATCGATCCGTTGTGCGCCAGAATTCGGTGTCTCATATCATCGTCCCACAAGCCAC 5677 Query 152996 GTTCAGTTTAATGAGGTCATCGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAA 153055 || || | ||| | | | | || || ||||||||||| || |||| || Sbjct 5676 ACTCCGTCAA-----GTCCTTCAGGAGATGGTGATTCACCACTTGAAATTCTCCCGACAG 5622 Query 153056 CACTCGTCTCAAATATACATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTAT 153115 || || || ||| || || ||| | ||||| ||||| || || ||||| | || Sbjct 5621 GACGCGCCTATTATAAACGTTCGATGTGTACGGTTCGAAGGACTCATTGTTGCCCAAAAT 5562 Query 153116 TTGAGCCGTGGTTGCGGTCGGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGC 153175 ||| || || | || |||||||| |||| || | |||||| || | ||| ||| Sbjct 5561 TTGTGCGGTTGAAGCCGTCGGCATCGGTGCCAACAGTAGAGAATTGCGAATGCCATGCTT 5502 Query 153176 TCGAATGTCGTCCTTCAACGCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACAT 153235 ||| | || ||||| || ||| | |||||| ||| |||||| ||||||||| Sbjct 5501 GGCAATCTTCTCTTTCAATTCCGCCCAGTTCCACAGGTCCGTAGGTGTCTTGTTCCACAT 5442 Query 153236 GTCGTACTGTAACACTCCTCGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTC 153295 |||||||| || | || || | || || || | |||| ||| ||||| Sbjct 5441 ATCGTACTGCAAGATACCCTTGCTTACCGGGCTACCTTCGTACGTCTCGTATGGTCCGTC 5382 Query 153296 GCGTTGGGCCAGTTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTG 153355 || |||| |||||||||||||| | || || ||||| || ||||| ||||| Sbjct 5381 ACGGGCAGCCAACTCGCAGCTAGCCTCCAAGGCACCGTAGTAGATTGTTTCAAACATTTG 5322 Query 153356 TTTATTGAGAACGGCCGCTTCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTC 153415 | |||||| || || || |||||||| || |||| ||| | ||| || || Sbjct 5321 CTGATTGAGTTTTTGGGCCTCCTCACTCTCGTATGGGTATCGCATCAGGATAAACGCATC 5262 Query 153416 GGCCAGACCCTGGATACCGACGCCGATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCT 153475 ||||| ||| || | ||| | |||||||| | || | ||| || | ||| Sbjct 5261 GGCCATACCTTGCACACCAATACCGATGGGCCTGTGGCGCATGTTCGAACGACGCGCCTC 5202 Query 153476 CGCTATGGGATAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGT 153535 || | ||||||| ||| ||||| |||||||| | ||| ||| || |||| Sbjct 5201 CGGAACCGGATAGTAGTTGATGTCGATGATTTTGTTCAAGTTTCGCGTTACGGTCTTAGC 5142 Query 153536 TATCGCCTTAAGTTTCTCGAAATCATAGGTCATTTCGTCGA-CGCGTACGCATCGATTCA 153594 | | || ||||| | ||||| || || || ||| | | | ||| | || | Sbjct 5141 GACATCTTTCAGTTTGCCAAAATCGTACGTACGATC--CGATCTCACAAACAT-GTTTAA 5085 Query 153595 CGGCAATAGACGCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTG--TACTGCACGAT 153652 || | || || || ||||| || ||||| |||| || | | | | |||| |||||| Sbjct 5084 CG-CGATCGATGCAAGATTGCACACGGCAATCTCGTC--CTTTGAAGAGTACTCCACGAT 5028 Query 153653 CTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATT 153712 ||| | ||| ||||| ||| ||||| ||||| |||||||| ||||| || || || Sbjct 5027 CTCCGTGCAAAGGTTTGAGCACTTTATTGTGCCCACGTTTTGCTGGTTGCTCTTTCGGTT 4968 Query 153713 GCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGAT--- 153769 ||||| || ||| | ||||||||||| ||||||| || || || | ||| | || Sbjct 4967 ACACGCATCCTTGTACAGCATGTACGGCACGCCGGTTTCCACCTGTGATTCAATTATGGC 4908 Query 153770 AAACCTATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCG 153829 ||||| |||||||||||| || | | | |||| || || ||||||| | Sbjct 4907 AAACC---ACAGGTCCTGCGCCTTTACTTGGCGAATAAAGCGACCTTCCTTCTCGTAGCC 4851 Query 153830 CTCGTACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGG 153889 ||||||| || ||| ||||| ||||| | | || | | ||||| || | |||||| Sbjct 4850 CTCGTACCGTTTCTCGAACTCTTCGCCCCACGAATCAGACAATCCGGGGCAATCATGCGG 4791 Query 153890 ACACATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCA 153949 ||||| || |||||| |||| || | || || |||||| | |||||| | ||| Sbjct 4790 GCACATAAGACTCCACATTTCGTTAGCCTCCACTCGCTTCATGAATAAATCCGGTATCCA 4731 Query 153950 GAGCGCGTACATGAGGTCGCGCGC-CTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGAT 154008 || || || | | ||| ||||| | | | |||||| || |||| |||||||| Sbjct 4730 AAGGGCATAGAACATGTCTCGCGCACGTAC-CTCCTCCTTCCCTGTGTTCTTTTTCAGAT 4672 Query 154009 TGAG-CACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTA 154067 ||| || | | | | || ||||||| || || | ||||| || | || || Sbjct 4671 CGAGAAACTCGA-ACACATCACCGTGCCACGGCTCCAGGTAGATTGCAAATGCTCCGGGT 4613 Query 154068 CGC---TTTCCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGT 154124 ||| || || || |||||||||| ||| || | || ||| | ||||| | ||| || Sbjct 4612 CGCTTATTGCCTCCTTGATCGACGTACCGCGCCGTGTTATTGTACACGCGAAGCATCGGC 4553 Query 154125 TCCAGGCCGCTTGCGGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGA 154184 ||| || | | | | || || || ||| | | || || || | | Sbjct 4552 ACCAAACCATTGGAGATTCCATTTGTGCCCGCGATGTACGTTCCCTTCGCACGGATACAA 4493 Query 154185 TGCACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTC 154244 |||||||| | |||||||| ||| | |||||||||| ||||| | |||||| Sbjct 4492 TGCACGTTCAGCCCAATGCCACCGGCTGACTTTGATATCAGGGCGCACTGTTTCAGCGTA 4433 Query 154245 CTGTAGATGCCGTCGATGCTATCGTCGCGGACGCCG--AGCAAGAAACACGAACACATTT 154302 |||||| ||||| ||||| |||| ||||| || | || ||| || ||| | | | Sbjct 4432 TCGTAGATACCGTCAATGCTGTCGT--CGGACATCGTCAACAGGAAGCAGGAAGAAAGCT 4375 Query 154303 GCGGAATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGC 154362 ||||| | || |||| | ||| | || ||| || || || || | | | Sbjct 4374 GCGGACGTTGTGTCGCCGCAGCAAACATAGTTGGAGAAGCATGGGTGAAAAATCGCTCCG 4315 Query 154363 TCATCATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGA 154422 || || |||||| |||||||| | |||||||| ||||||||||| |||| || | Sbjct 4314 ACAGCAGATTGTACGTCTCGATGGCCGCATCGATATCCTCGCCGTGAATACCGATGGCAA 4255 Query 154423 CGCGCATGAGCATGTGCTGCGGACGTTCGGCGA 154455 ||||||| ||||| ||||| ||||||||| ||| Sbjct 4254 CGCGCATCAGCATATGCTGGGGACGTTCGACGA 4222 >seq38620 Length=1898 Score = 105 bits (116), Expect = 7e-18 Identities = 175/250 (70%), Gaps = 2/250 (1%) Strand=Plus/Minus Query 52305 CTGCTGAATGCGTTCGAGCACG-TGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAA 52363 ||| | || ||| ||||| ||| | |||||||| || ||||| | ||||| |||| Sbjct 282 CTGTTTAACGCGATCGAG-ACGCTACCGTGCGTGAAAAAGAAGGCCGATTGGGCTCTGAA 224 Query 52364 GTGGATCGAGAGCGACACCGCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGA 52423 |||||| ||| | | |||| | | || || | || |||||||| || || Sbjct 223 CTGGATCTCAAGCAAGAAGGCCAACTTTGGTGAACGGGTTGTTGCCTTCGCTGCCGTGGA 164 Query 52424 GGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAAT 52483 ||| | ||||| ||| || ||||| ||||| || | |||| | | ||| | || Sbjct 163 GGGTATCTTTTTCAGCGGTAGTTTTGCGGCCATTTTCTGGCTTAAGAAGCGCGGCTTGAT 104 Query 52484 GCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTT 52543 ||| || || |||||| |||||| |||| ||||||||||||||||||||| ||||| Sbjct 103 GCCAGGACTCACGTTCTCGAACGAGCTGATCTCGCGCGACGAAGGACTGCACTGCGACTT 44 Query 52544 TGCGTGCCTC 52553 ||| || ||| Sbjct 43 TGCCTGTCTC 34 >seq20012 Length=3655 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 138400 CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG 138459 ||||| || | || | | | || ||||| ||||| || ||||| || ||||| Sbjct 2498 CGCAACACCAGGTGAAGGGTAGATTCCTTCTGAATATTATAGTCAGACAACGTACGACCA 2557 Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 ||||| || ||||| |||| |||| |||||||| || || || || ||||||||||| Sbjct 2558 TCCTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGATCTGGTGGAATACCTTCTTTA 2617 Query 138520 TCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGC 138579 || ||| ||| || | | ||| | |||||| | | ||| ||||||| || | Sbjct 2618 TCCTGGATCTTTGCCTTCACATTTTCGATGGTGTCAGAGGGCTCGACCTCGAGAGTTATG 2677 Query 138580 GTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || || ||||| || ||||| || ||||||||||| Sbjct 2678 GTCTTCCCAGTGAGCGTTTTGACGAAAATCTGCAT 2712 >seq50967 Length=297 Score = 96.9 bits (106), Expect = 3e-15 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| ||||||| |||||| || ||||| | | || || || || |||||||| || Sbjct 79 GCCTCCTCGCAGACGCAACACCAAATGCAGAGTCGATTCTTTCTGGATGTTGTAATCCGA 138 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || || || || || || || || |||| |||| ||||||||||| || || || Sbjct 139 CAAGGTGCGACCATCTTCCAGCTGCTTTCCGGCGAAGATAAGACGCTGTTGATCTGGCGG 198 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 || |||||||| || ||| | |||| || | | || | || |||| | ||||| Sbjct 199 GATTCCTTCTTTATC-CTGAATCTTTGCCTTGACGTTCTCGATCGTATCGGATGGCTCCA 257 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAA 138605 |||||| || | |||||| || ||||||||||| || || Sbjct 258 CCTCGAGAGTGATCGTTTTGCCGGTCAGAGTTTTGACGAA 297 >seq42053 Length=1259 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | || || || | | | |||||||| ||||||||||||||| | Sbjct 1235 CCACCACGCAGACGAAGGACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAGTCGGAC 1176 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || |||||| || || || || | |||| | |||||| || || || || Sbjct 1175 AGGGTGCGTCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGGA 1116 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| ||| || ||| | | || | || || | | ||| ||| Sbjct 1115 ATGCCTTCCTTGTCCTGGATCTTAGCTTTCACATTCTCGATAGTATCCGAAGGCTCGACC 1056 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || ||||||||||| || || || |||||||| Sbjct 1055 TCCAGAGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 1009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495945734962560