Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq42053 89.7 4e-13 seq20890 87.8 1e-12 >seq42053 Length=1259 Score = 89.7 bits (98), Expect = 4e-13 Identities = 163/239 (68%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| |||| | | || || || | ||| || || || || |||||||| ||| Sbjct 1235 CCACCACGCAGACGAAGGACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAGTCGGAC 1176 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | |||| || | || ||||||||| | ||||||||||| || || ||| Sbjct 1175 AGGGTGCGTCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGGA 1116 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||||||||| || || ||| ||| | || |||||||| | || || Sbjct 1115 ATGCCTTCCTTGTCCTGGATCTTAGCTTTCACATTCTCGATAGTATCCGAAGGCTCGACC 1056 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAATAAA 15188 || | || ||||| || || |||||||| || || || || |||||| | |||| || Sbjct 1055 TCCAGAGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCATACTATAAATGAA 997 >seq20890 Length=2679 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 14949 GCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCT 15008 |||||| |||| | | || | ||||||||| || || || || ||||||||||| Sbjct 1409 GCCACCACGCAGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGAATGTTGTAATCAGA 1468 Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068 || | | |||| || | || ||||| ||| | |||| |||||| || || || Sbjct 1469 CAGCGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGATCTGGGGG 1528 Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || || |||||||| || ||| ||| ||| | || || ||||| ||| || Sbjct 1529 GATACCCTCCTTGTCCTGGATCTTGGCTTTCACATTCTCGATCGTATCCGAGGGTTCAAC 1588 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || | ||||||||| ||||| || || ||||| || || || ||||| || Sbjct 1589 CTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTCACGAAGATCTGCATCTT 1639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357169649460680