Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1636 129 6e-25 seq20012 125 7e-24 seq42053 116 4e-21 seq50967 114 1e-20 seq20890 95.1 1e-14 seq3519 93.3 4e-14 seq38620 84.2 2e-11 >seq1636 Length=7642 Score = 129 bits (142), Expect = 6e-25 Identities = 920/1461 (63%), Gaps = 55/1461 (4%) Strand=Plus/Minus Query 146048 CCTTGATGAGATACTGGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACA 146107 |||| | ||||| || || ||||| ||||| || || | || |||||||| ||| | Sbjct 5664 CCTTCAGGAGATGGTGATTCACCACTTGAAATTCTCCCGACAGGACGCGCCTATTATAAA 5605 Query 146108 CGTTGCTGGTGAACGGCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGG 146167 |||| ||| |||| ||||| ||||| ||||| || | || || || || | ||| | Sbjct 5604 CGTTCGATGTGTACGGTTCGAAGGACTCATTGTTGCCCAAAATTTGTGCGGTTGAAGCCG 5545 Query 146168 TAGGCATGTACGCCACCAGCAAAGAGTTTCTCACGCCGTGTCTTTG-AATCTTTTCCCGT 146226 | ||||| |||| ||| | ||| || | | ||| || ||| | |||||| || Sbjct 5544 TCGGCATCGGTGCCAACAGTAGAGAATTGCGAATGCCATG-CTTGGCAATCTTCTCTTTC 5486 Query 146227 AGTTTGGACCAATTCCACAAATGATCCGTGGGATAGATATTGTAGTTGTCGTAATGCATA 146286 | || | ||| ||||||| | ||||| || | || | | ||||| |||| Sbjct 5485 AATTCCGCCCAGTTCCACA---GGTCCGTAGGTGTCTTGTTCCACATATCGTACTGCAAG 5429 Query 146287 GTGCCGCGGAACAGGGGGCTATTCTCGTACGATTCATAAGGACCGTCGATCTTGGCCAGT 146346 | || | | |||||| ||||||| || || || ||||| |||| Sbjct 5428 ATACCCTTGCTTACCGGGCTACCTTCGTACGTCTCGTATGGTCCGTCACGGGCAGCCAAC 5369 Query 146347 TCGCAGCTAGCTTCCAGAGCCGAAAAGTATATGGTCTCCGCGATCATGTAGTTGACGCTC 146406 ||||||||||| |||| || |||| || || || || | |||| | Sbjct 5368 TCGCAGCTAGCCTCCAAGGCACCGTAGTAGATTGTTTCAAACATTTGCTGATTGAGTTTT 5309 Query 146407 CTGGCCTCCTCGCTGTCGTAGGGGATATCG-AGAAGCACAAAGGCGTCGGCGAGACCCTG 146465 ||||||||| || ||||| ||| ||||| | || | ||| || ||||| | ||| || Sbjct 5308 TGGGCCTCCTCACTCTCGTATGGG-TATCGCATCAGGATAAACGCATCGGCCATACCTTG 5250 Query 146466 TATCCCGACACCAACGGGGCGGTGTTTCTTGTTACTGTTCGCAGCGCC--CGCAGTGGGA 146523 | || | ||| | ||| | ||| | |||| | || ||||| || | ||| Sbjct 5249 CACACCAATACCGATGGGCCTGTGGCGCATGTTC--GAACGACGCGCCTCCGGAACCGGA 5192 Query 146524 TAGTGGTTGCTGTCGATGATCTTGTTGAGATTACGCACGACAATTTTCGTCAAACGATTC 146583 |||| |||| |||||||||| ||||| | || ||| || | || | | | ||| Sbjct 5191 TAGTAGTTGATGTCGATGATTTTGTTCAAGTTTCGCGTTACGGTCTTAGCGACATCTTTC 5132 Query 146584 AGCAGGACATAGTCAAATGTTTTAGTTTTAACGTTGACGCACTTGTTGACGGCGATAGAG 146643 || | || | || | || | | | | | || || |||| | ||||| || Sbjct 5131 AGTTTGCCAAAATCGTACGTACGA-TCCGATC--TCACAAACATGTTTAACGCGATCGAT 5075 Query 146644 GCCAAGTTACATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCTCGGCGCAGAGG 146703 || | || || |||||| |||||||||| | |||| ||| ||||| | ||| ||| Sbjct 5074 GCAAGATTGCACACGGCAATCTCGTCCTTTGAAGAGTACTCCACGATCTCCGTGCAAAGG 5015 Query 146704 TTGCTGCACTTGATGATGCCCAAAtttttttGGTTACTAAACTT---GTTGCAGGGGTCC 146760 || |||||| || |||||| |||| ||||| || ||| ||| || | ||| Sbjct 5014 TTTGAGCACTTTATTGTGCCCACGTTTTGCTGGTTGCT---CTTTCGGTTACACGCATCC 4958 Query 146761 TTGTAGAGCATGTACGGTCCCCCGGTTTCGACATTGGTCTCGACGATGAATCTAAACAAA 146820 ||||| ||||||||||| | |||||||| || | | || | ||| | || || | Sbjct 4957 TTGTACAGCATGTACGGCACGCCGGTTTCCACCTGTGATTCAATTATG--GCAAACCACA 4900 Query 146821 TCT-CTG-GCCTTTACTTGTCTTTCGTACAGTTTATTCTTTTCGTATTTCTCGTACAATA 146878 | ||| ||||||||||| | | | | ||| ||||| ||||||| | Sbjct 4899 GGTCCTGCGCCTTTACTTGGCGAATAAAGCGACCTTCCTTCTCGTAGCCCTCGTACCGTT 4840 Query 146879 TTTCAAAACTAGAACCGTACTCGTCGAGGAGGCCGGGATACTTTTTGGGACAGAACAGCG 146938 | || || || || || | ||||| | | | || || | || Sbjct 4839 TCTCGAACTCTTCGCCCCACGAATCAGACAATCCGGGGCAATCATGCGGGCACATAAGAC 4780 Query 146939 ACCATTCTTTATTCTCCTTCACGCGTTCCATAAACAAATCGGGAATCCAAAGGCCCAGCA 146998 ||| || || ||| ||| || | ||| || ||||| || ||||||||| | | Sbjct 4779 TCCACATTTCGTTAGCCTCCACTCGCTTCATGAATAAATCCGGTATCCAAAGGGCATAGA 4720 Query 146999 TCAAGTCGCGAGCCTTGGCGTCCTCGGAGCCCATGTTGCGTCTCAAGTTGAGGACATCGT 147058 || ||| || || | ||||| || |||| | ||| | ||| | ||| Sbjct 4719 ACATGTCTCGCGCACGTACCTCCTCCTTCCCTGTGTTCTTTTTCAGATCGAGAAACTCGA 4660 Query 147059 AAATTTCCGGATGCCAAGGCTCCACGTATGCGGCGAGTGCGCCTTTTCGCTTA---CCGC 147115 | | || ||||| ||||||| ||| || | ||| || ||||||| || | Sbjct 4659 ACACATCACCGTGCCACGGCTCCAGGTAGATTGCAAATGCTCCGGGTCGCTTATTGCCTC 4600 Query 147116 CCTGATCGACGTGGCGCACCATGTTATTGAAGACTCGTAACATGGACACGAGGCCGCCGG 147175 | |||||||||| ||| || |||||||| | || || | ||| | ||| | || || Sbjct 4599 CTTGATCGACGTACCGCGCCGTGTTATTGTACACGCGAAGCATCGGCACCAAACCATTGG 4540 Query 147176 A------TTTTGTGGTGCCGTTGTA------TTGAGCGCTGACGCTTTGCACGCTCAGCC 147223 | |||||| || |||| | || | || | |||||| |||||| Sbjct 4539 AGATTCCATTTGTGCCCGCGATGTACGTTCCCTTCGCACGGATACAATGCACGTTCAGCC 4480 Query 147224 CGAGACCTCCGCCCAGATTCGAAATCAAAGCGGACTCGTGCAAGGTCTTGTAGATGCCGT 147283 | | || ||| | || || |||| ||| ||| | || || | |||||| |||| Sbjct 4479 CAATGCCACCGGCTGACTTTGATATCAGGGCGCACTGTTTCAGCGTATCGTAGATACCGT 4420 Query 147284 CGATGCTGTCTTCCTTGATGCATTG----CAGGAAACACGAACACATTTGGGGACGACAC 147339 | |||||||| || || ||| | |||||| || ||| | | || ||||| Sbjct 4419 CAATGCTGTCGTC--GGA--CATCGTCAACAGGAAGCAGGAAGAAAGCTGCGGACGTTGT 4364 Query 147340 GTGCCCGCCGCAAACAGCGTGGGGCTGGCGTGCGTG--AACGTGCCCAGACTCATCA-AT 147396 || |||| ||||||| || || || || ||| || || | || || || || Sbjct 4363 GTCGCCGCAGCAAACATAGTTGGAGAAGCATGGGTGAAAAATCGCTCCGA--CAGCAGAT 4306 Query 147397 TGATACGTTTCAATGGCGCTCAT-AACGTCATCGCCGTGAATGGCCAGGGCGACGCGCAT 147455 || ||||| || ||||| | ||| | || ||||||||||| | | ||| |||||||| Sbjct 4305 TG-TACGTCTCGATGGC-CGCATCGATATCCTCGCCGTGAATACCGATGGCAACGCGCAT 4248 Query 147456 GAGCATGTGCTGGGGTCGTTC 147476 ||||| |||||||| ||||| Sbjct 4247 CAGCATATGCTGGGGACGTTC 4227 >seq20012 Length=3655 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||||||||| || | ||||| || || |||||||| || || | Sbjct 2486 CCACCACGAAGTCGCAACACCAGGTGAAGGGTAGATTCCTTCTGAATATTATAGTCAGAC 2545 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||| ||| ||| || |||||||| || ||| |||||| ||||||||||| || || Sbjct 2546 AACGTACGACCATCCTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGATCTGGTGGA 2605 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || || || ||| ||| || ||| | | ||||| |||||| | |||||| Sbjct 2606 ATACCTTCTTTATCCTGGATCTTTGCCTTCACATTTTCGATGGTGTCAGAGGGCTCGACC 2665 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || || || || || ||||| || ||||||||||| Sbjct 2666 TCGAGAGTTATGGTCTTCCCAGTGAGCGTTTTGACGAAAATCTGCAT 2712 >seq42053 Length=1259 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || ||||| || ||||| ||||| ||| | Sbjct 1235 CCACCACGCAGACGAAGGACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAGTCGGAC 1176 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || ||||| || |||||| ||||||| ||||||||||| || || Sbjct 1175 AGGGTGCGTCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGGA 1116 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||| ||||||||| ||| || || | | |||| || |||| | |||||| Sbjct 1115 ATGCCTTCCTTGTCCTGGATCTTAGCTTTCACATTCTCGATAGTATCCGAAGGCTCGACC 1056 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || ||||| |||||||| || || || |||||||| Sbjct 1055 TCCAGAGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 1009 >seq50967 Length=297 Score = 114 bits (126), Expect = 1e-20 Identities = 151/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||||||||||||| | || || ||||| || || |||||||| || |||||| | Sbjct 92 CGCAACACCAAATGCAGAGTCGATTCTTTCTGGATGTTGTAATCCGACAAGGTGCGACCA 151 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| ||||| ||| |||| | ||||| ||||| || || || || || || Sbjct 152 TCTTCCAGCTGCTTTCCGGCGAAGATAAGACGCTGTTGATCTGGCGGGATTCCTTCTTTA 211 Query 127019 TCCGTGATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| ||| | | || ||||| | |||| || || | ||| || |||| || | Sbjct 212 TCC-TGAATCTTTGCCTTGACGTTCTCGATCGTATCGGATGGCTCCACCTCGAGAGTGAT 270 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAA 127104 ||||||||||||||||||||| || || Sbjct 271 CGTTTTGCCGGTCAGAGTTTTGACGAA 297 >seq20890 Length=2679 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | || | ||||| ||| | || ||||| || ||||| |||||||| Sbjct 1407 GCGCCACCACGCAGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGAATGTTGTAATCA 1466 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 || |||||| || || ||||| || || ||| | |||| ||||||||||| || Sbjct 1467 GACAGCGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGATCTGGG 1526 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || |||||||||||| ||| || || | | |||| || |||| || Sbjct 1527 GGGATACCCTCCTTGTCCTGGATCTTGGCTTTCACATTCTCGATCGTATCCGAGGGTTCA 1586 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || | ||| | || || || || || ||||| || || |||||||| Sbjct 1587 ACCTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTCACGAAGATCTGCAT 1636 >seq3519 Length=1813 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 ||| || || || |||||||||||||| | || || ||||| || || |||||||| Sbjct 1618 TCCTCCTCGCAAACGCAACACCAAATGCAGAGTCGATTCTTTCTGGATGTTGTAATCCGA 1677 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 || |||||| ||| || ||||| ||||| ||| |||| | ||||| ||||| || || Sbjct 1678 CAAGGTGCGACCATCTTCCAGCTGCTTTCCGGCGAAGATAAGACGCTGTTGATCTGGCGG 1737 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTG-CTTGA 127037 || || ||||| ||| ||| | | || ||||| Sbjct 1738 GATTCCTTCCTTATCC-TGAATCTTTGCCTTGA 1769 >seq38620 Length=1898 Score = 84.2 bits (92), Expect = 2e-11 Identities = 170/250 (68%), Gaps = 2/250 (1%) Strand=Plus/Minus Query 47046 CTTTTGAACGGTTTCGAGAGCATGCCCTGCGTGCGCAGAAAGGCCGAGTGGGCCATGAAG 47105 || || |||| |||||| | || |||||| | |||||||| ||||| |||| Sbjct 282 CTGTTTAACGCGATCGAGACGCTACCGTGCGTGAAAAAGAAGGCCGATTGGGCTCTGAAC 223 Query 47106 TACATTGAAAACGAAAACGTCA-CTCTGGCCGAACGTTTGATCGCTTTCGCCATCGTCGA 47164 | || || | | || | || || ||| ||||| | | || ||||| ||| || Sbjct 222 TGGATCTCAAGCAAGAAGGCCAACTTTGGT-GAACGGGTTGTTGCCTTCGCTGCCGTGGA 164 Query 47165 GGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATGAAAACCAAAGGAGTTAT 47224 ||| |||| ||| || || |||||||| || || | | || | || | || Sbjct 163 GGGTATCTTTTTCAGCGGTAGTTTTGCGGCCATTTTCTGGCTTAAGAAGCGCGGCTTGAT 104 Query 47225 GCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAACTT 47284 ||| || |||||||| |||||||| |||||| | |||||||| |||||| | |||| Sbjct 103 GCCAGGACTCACGTTCTCGAACGAGCTGATCTCGCGCGACGAAGGACTGCACTGCGACTT 44 Query 47285 TGCCTGTCTC 47294 |||||||||| Sbjct 43 TGCCTGTCTC 34 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475197382939520