Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq42053 116 4e-21 seq20890 111 2e-19 seq50967 100 3e-16 seq3519 82.4 9e-11 >seq42053 Length=1259 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| ||||| || |||||| || || ||||||||||| || ||||| |||| || Sbjct 1217 ACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCA 1158 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||||||||| ||||| ||||| |||||||| || | || | || ||||||||| | Sbjct 1157 AGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGG 1098 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| || | || | | || || | || || |||| |||||||| ||| Sbjct 1097 ATCTTAGCTTTCACATTCTCGATAGTATCCGAAGGCTCGACCTCCAGAGTGATGGTCTTG 1038 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||||| || || || ||||| ||||| Sbjct 1037 CCAGTCAGAGTCTTCACGAAGATCTGCAT 1009 >seq20890 Length=2679 Score = 111 bits (122), Expect = 2e-19 Identities = 153/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||||||| | || |||||| || || ||||| || || || ||||| |||| || Sbjct 1427 CACCAGATGAAGGGTCGACTCCTTCTGAATGTTGTAATCAGACAGCGTGCGTCCGTCCTC 1486 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||||||||| |||| |||||||| || | || | | |||||||||| Sbjct 1487 CAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGATCTGGGGGGATACCCTCCTTGTCCTG 1546 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| || | || | | ||| || | ||| || || | || ||||| || Sbjct 1547 GATCTTGGCTTTCACATTCTCGATCGTATCCGAGGGTTCAACCTCAAGGGTAATGGTCTT 1606 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 ||||| || ||||| || ||||| ||||| ||| Sbjct 1607 ACCCGTGAGGGTTTTCACGAAGATCTGCATCTTG 1640 >seq50967 Length=297 Score = 100 bits (110), Expect = 3e-16 Identities = 154/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||||| | ||||||||||| ||||| || || || ||||| ||||| || | Sbjct 78 TGCCTCCTCGCAGACGCAACACCAAATGCAGAGTCGATTCTTTCTGGATGTTGTAATCCG 137 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | | ||||| | || || |||||||| |||||||| || | ||||| || || | || Sbjct 138 ACAAGGTGCGACCATCTTCCAGCTGCTTTCCGGCGAAGATAAGACGCTGTTGATCTGGCG 197 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | | || || ||| ||||| ||||| || | | ||| ||| | |||| Sbjct 198 GGATTCCTTCTTTATCCTGAATCTTTGCCTTGACGTTCTCGATCGTATCGGATGGCTCCA 257 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAA 46584 | || | ||||| |||||||| ||||| ||||| || || Sbjct 258 CCTCGAGAGTGATCGTTTTGCCGGTCAGAGTTTTGACGAA 297 >seq3519 Length=1813 Score = 82.4 bits (90), Expect = 9e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||||| ||||||||||||| ||||| || || || ||||| ||||| || || Sbjct 1619 CCTCCTCGCAAACGCAACACCAAATGCAGAGTCGATTCTTTCTGGATGTTGTAATCCGAC 1678 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | ||||| | || || |||||||| |||||||| || | ||||| || || | ||| Sbjct 1679 AAGGTGCGACCATCTTCCAGCTGCTTTCCGGCGAAGATAAGACGCTGTTGATCTGGCGGG 1738 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | ||||| ||| ||||| ||||| || | | ||| ||| | ||||| Sbjct 1739 ATTCCTTCCTTATCCTGAATCTTTGCCTTGACGTTCTCGATCGTATCGGATGGCTCCACC 1798 Query 46547 TCCACCGTGATGGTT 46561 || | ||||| ||| Sbjct 1799 TCGAGAGTGATCGTT 1813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564877721376960