Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq609 123 3e-23 seq38620 86.0 8e-12 >seq609 Length=4955 Score = 123 bits (136), Expect = 3e-23 Identities = 275/404 (68%), Gaps = 8/404 (2%) Strand=Plus/Plus Query 13592 CCGCATCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 13651 |||| |||| || ||||| | || ||| ||| |||||||| || | |||||||| Sbjct 1807 CCGCTTCTACCAGGCCTCGACGTCCGAGCTGTACGGTAAGGTGGCTGAAACGCCACAAAA 1866 Query 13652 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGT-TGCGGCACATT 13710 ||| ||||||| ||||| || || ||| || | | | ||| | | ||| | | | Sbjct 1867 CGAAAAGACACCGTTCTATCCGCGTTCGCCATATGCTTGCGCGAAGATGTACGG-ATACT 1925 Query 13711 GGCTCGTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCA 13770 || |||| | || ||||||||| | |||| |||| || ||| ||| || || |||| Sbjct 1926 GGATCGTGATAAACTACCGCGAGGCCTACGATATGTTCGCCTGCAACGGGATTCTATTCA 1985 Query 13771 ACCATGAATCACCGAGACGAGGTGCAGACTTTGTGACCATGAAGATTAC-CG-AGGGTAT 13828 |||| || |||||| | || || | | |||||||| ||||| || || ||| Sbjct 1986 ACCACGAGTCACCGCGCCGGGGAGAGAATTTTGTGACACGAAAGATCACTCGTTCGGTGG 2045 Query 13829 CAAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAG 13888 | | ||||| || | ||| | | ||||||| ||||| | || | || | Sbjct 2046 CGA--AAATCTCACTCGGCCAGCTGGAATGCCTTGAATTAGGTAATCTCGACTCAAAGCG 2103 Query 13889 AGATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGA 13948 ||| ||||| ||||| || ||||| || ||||| |||||||| ||| | || || || || Sbjct 2104 AGACTGGGGCCACGCCAAAGACTACGTGGAAGCCATGTGGCTGATGATGCAGCAGGA-GA 2162 Query 13949 AGCC-GACGAATATGTAGTAGCAACGGGTGAGACCCATTCAGTG 13991 |||| || || | || | || || || ||||| ||||| ||| Sbjct 2163 AGCCGGAGGATTTCGTTATCGCCACCGGAGAGACACATTCGGTG 2206 >seq38620 Length=1898 Score = 86.0 bits (94), Expect = 8e-12 Identities = 146/209 (70%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 102124 AAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCCTTTGCTGAGC 102183 ||||||| || ||||||||| |||| ||| | | ||| | ||||| ||| | Sbjct 248 AAAAGAAGGCCGATTGGGCTCTGAACTGGATCTCAAGCAAGAAGGCCAACTTTGGTGAAC 189 Query 102184 GACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTATT 102242 | | | || || || || ||||||||||| ||| || | || ||| || ||| Sbjct 188 GGGTTGTTGCCTTCGCTGCCGTGGAGGGTATCTTTTTCAGCGG-TAGTTTTGCGGCCATT 130 Query 102243 TATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCT 102302 | ||||| |||||||| || | |||||||| ||| ||||| |||||||| ||||| Sbjct 129 TTCTGGCTTAAGAAGCGCGGCTTGATGCCAGGACTCACGTTCTCGAACGAGCTGATCTCG 70 Query 102303 CGTGACGAGGGACTCCACCAAGAGTTTGC 102331 || ||||| ||||| ||| || ||||| Sbjct 69 CGCGACGAAGGACTGCACTGCGACTTTGC 41 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620346304274560