Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1636 145 9e-30 seq609 132 6e-26 seq3179 93.3 5e-14 >seq1636 Length=7642 Score = 145 bits (160), Expect = 9e-30 Identities = 883/1396 (63%), Gaps = 38/1396 (3%) Strand=Plus/Minus Query 105934 ATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 105993 ||| | ||||| ||||| ||||| ||| | ||||| || ||||| ||||||||||| || Sbjct 5609 ATAAACGTTCGATGTGTACGGTTCGAAGGACTCATTGTTGCCCAAAATTTGTGCGGTTGA 5550 Query 105994 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTG---ATGCG 106050 || || ||||| ||||||| || ||| || |||| || | |||| || Sbjct 5549 AGCCGTCGGCATCGGTGCCAACAGTAGAGAATTGCGAATGCCATG---CTTGGCAATCTT 5493 Query 106051 TTCCTTGAGAACATCCCAGT--CGTAGTTGAGCTTGGTTTCACCTTCCCACATATCAAAT 106108 || || | | |||||| | || | | | ||| || |||| ||||||| | Sbjct 5492 CTCTTTCAATTCCGCCCAGTTCCACAGGTCCG-TAGGTGTCTTGTTCC-ACATATCGTAC 5435 Query 106109 TG-AAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTT---GGGC 106164 || ||| |||||| ||| | || || | ||||| || | || | |||| Sbjct 5434 TGCAAGATACCCTTGCTTACCGGGCTA-CCTTCGTACGTCTCGTATGGTCCGTCACGGGC 5376 Query 106165 TTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGC 106224 |||||| || ||||| ||||||| || ||| || || |||||||| || | Sbjct 5375 ---AGCCAACTCGCAGCTAGCCTCCAAGGCACCGTAGTAGATTGTTTCAAACATTTGCTG 5319 Query 106225 ATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGC 106284 ||| | | | ||| || || || ||| ||| || || ||||| |||| || Sbjct 5318 ATTGAGTTTTTGGGCCTCCTCACTCTCGTATGGGTATCGCATCAGGATAAACGCATCGGC 5259 Query 106285 GAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC 106344 | |||||| ||||| | ||| || || ||||| ||||| || || ||||| | Sbjct 5258 CATACCTTGCACACCAATACCGATGGGCCTGTGGCGCATGTTCGAACGACGCGCCTCCGG 5199 Query 106345 AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGAT 106404 ||| ||||| | || |||| |||| | ||| | ||| || || |||| | || Sbjct 5198 AACCGGATAGTAGTTGATGTCGATGATTTTGTTCAAGTTTCGCGTTACGGTCTTAGCGAC 5139 Query 106405 TTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGC 106464 || | ||||| || |||| | || ||| || || | ||| || | | || Sbjct 5138 ATCTTTCAGTTTGCCAAAATCGTACGTACGA-TCCGATC--TCACAAACATGTTTAACGC 5082 Query 106465 GATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGT 106524 ||| ||||| | |||||| || || |||| ||||| | |||||| | || || || Sbjct 5081 GATCGATGCAAGATTGCACACGGCAATCTCGTCCTTTGAAGAGTACTCCACGATCTCCGT 5022 Query 106525 ACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGC 106584 || | ||| || | ||| || || |||| || | ||||| |||||| ||| ||||| Sbjct 5021 GCAAAGGTTTGAGCACTTTATTGTGCCCACGTTTTGCTGGTTGCTCTTTCGGTTACACGC 4962 Query 106585 ATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCA 106644 ||||||||| |||||||| ||| || || ||| |||||| | | || || ||| Sbjct 4961 ATCCTTGTACAGCATGTACGGCACGCCGGTTTCCACCTGTGATTCAATTATGGCAAACCA 4902 Query 106645 CACAT-CGGCGGCTGGTACAATGGCG-TTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAG 106702 || | | ||| || ||| ||||| | || || ||| |||||| ||| Sbjct 4901 CAGGTCCTGCGCCT-TTAC-TTGGCGAATAAAGCGACCTTCCTTCTCGTAGCCCTCGTAC 4844 Query 106703 AGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAA 106762 | || ||||| || ||| || || || | || || | | || || | | Sbjct 4843 CGTTTCTCGAACTCTTCGCCCCACGAATCAGACAATCCGGGGCAATCATGCGGGCACATA 4784 Query 106763 AGAGACCA---TTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGG 106819 ||| ||| || | ||||| || ||||||||||| | || || ||||| ||| Sbjct 4783 AGACTCCACATTTCGTTAGCCTCC---ACTCGCTTCATGAATAAATCCGGTATCCAAAGG 4727 Query 106820 GATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGG 106879 | | || | |||| || |||| || | ||| ||| | | || || Sbjct 4726 GCATAGAACATGTCTCGCGCACGTACCTCCTCCTTCCCTGTGTTCTTTTTCAGATCGAGA 4667 Query 106880 AACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---A 106936 ||||| | | ||| ||||||| ||||| || |||| ||| | | ||| ||| | Sbjct 4666 AACTCGAACACATCACCGTGCCACGGCTCCAGGTAGATTGCAAATGCTCCGGGTCGCTTA 4607 Query 106937 CGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATA 106996 || |||||| || || ||||| ||| || | ||||||||||| || | | | Sbjct 4606 TTGCCTCCTTGATCGACGTACCGCGCCGTGTTATTGTACACGCGAAGCATCGGCACCAAA 4547 Query 106997 CCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCTCACATCATGGA 107054 |||| || |||||||| ||| ||| ||| | | || || | | | ||| | Sbjct 4546 CCATTGGAGATTCCATTTGTGCCCGCGATGTAC--GTTCCCTTCGCACGGATACAATGCA 4489 Query 107055 TGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCAT 107114 || || |||||| || || || ||||||| || | || |||| | || || | | Sbjct 4488 CGTTCAGCCCAATGCCACCGGCTGACTTTGATATCAGGGCGCACTGTTTCAGCGTATCGT 4429 Query 107115 AGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTC 107174 ||||||||| || ||| || | | | |||||||| || | |||||| | Sbjct 4428 AGATACCGTCAATGCTGTCGTCGGACATCGTCAACAGGAAGCAGGAAGAAAGCTGCGGAC 4369 Query 107175 TTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCT 107234 | |||| | ||| || | ||||| | || || |||| | | | |||| | Sbjct 4368 GTTGTGTCGCCGCAGCAAACATAGTTGGAGAAGCATGGGTGAAAAATCGCTCCGACAGCA 4309 Query 107235 TGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCA 107294 | ||| ||||| | | | | ||| || || || ||||| || |||||||| || |||| Sbjct 4308 GATTGTACGTCTCGATGGCCGCATCGATATCCTCGCCGTGAATACCGATGGCAACGCGCA 4249 Query 107295 TAAACATGTATTGGGG 107310 | | ||| | ||||| Sbjct 4248 TCAGCATATGCTGGGG 4233 >seq609 Length=4955 Score = 132 bits (146), Expect = 6e-26 Identities = 277/404 (69%), Gaps = 8/404 (2%) Strand=Plus/Plus Query 6899 CCGCATCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 6958 |||| |||| || ||||| | || ||| ||| |||||||| || | |||||||| Sbjct 1807 CCGCTTCTACCAGGCCTCGACGTCCGAGCTGTACGGTAAGGTGGCTGAAACGCCACAAAA 1866 Query 6959 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGT-TGCGGCACATT 7017 ||| ||||||| ||||| || || ||| || | | | ||| | | ||| | | | Sbjct 1867 CGAAAAGACACCGTTCTATCCGCGTTCGCCATATGCTTGCGCGAAGATGTACGG-ATACT 1925 Query 7018 GGCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCA 7077 || |||| | ||| ||||||||| | |||| |||| || ||| ||| || || |||| Sbjct 1926 GGATCGTGATAAACTACCGCGAGGCCTACGATATGTTCGCCTGCAACGGGATTCTATTCA 1985 Query 7078 ACCATGAATCACCGAGACGAGGTGCAGACTTTGTCACAAAGAAGATTAC-CG-AGGGTAT 7135 |||| || |||||| | || || | | ||||| ||| ||||| || || ||| Sbjct 1986 ACCACGAGTCACCGCGCCGGGGAGAGAATTTTGTGACACGAAAGATCACTCGTTCGGTGG 2045 Query 7136 CAAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAG 7195 | | ||||| || | ||| | | ||||||| ||||| | || | || | Sbjct 2046 CGA--AAATCTCACTCGGCCAGCTGGAATGCCTTGAATTAGGTAATCTCGACTCAAAGCG 2103 Query 7196 AGATTGGGGTCACGCGAAGGACTATGTTGAAGCCATGTGGCTCATGCTTCAACAAGAGGA 7255 ||| ||||| ||||| || ||||| || |||||||||||||| ||| | || || || || Sbjct 2104 AGACTGGGGCCACGCCAAAGACTACGTGGAAGCCATGTGGCTGATGATGCAGCAGGA-GA 2162 Query 7256 AGCC-GACGAATATGTAGTAGCAACGGGTGAGACCCATTCAGTG 7298 |||| || || | || | || || || ||||| ||||| ||| Sbjct 2163 AGCCGGAGGATTTCGTTATCGCCACCGGAGAGACACATTCGGTG 2206 >seq3179 Length=6791 Score = 93.3 bits (102), Expect = 5e-14 Identities = 266/405 (66%), Gaps = 8/405 (2%) Strand=Plus/Plus Query 168291 CCCGTACCGATACCTTCGGTTCCATTCACGAGAACCATTGGTATGGTTGGCATGTAAAAG 168350 || |||||||||||||| | |||||| | || | ||||||||| |||||| ||| | Sbjct 3537 CCAGTACCGATACCTTCCGCTCCATTTATCAGCAGCATTGGTATAATTGGCAAGTACCAA 3596 Query 168351 TCTGGTTCAATTGAGCGCCCATCATCATC---CAAGTAGTTGAGGATCGGGTCATCCCGA 168407 | |||||||| |||| || || || | || | || | || || || | Sbjct 3597 ACGGGTTCAAT---GCGCTGATTGTCCTCGTTCTGATACTCCAGCAGTGGATCGTCGAGC 3653 Query 168408 GGATCAAAGATCTTGCGAGCCTCTTTGGTAAGTTTTGTGAAAATGTACCTCGTCTGAGAA 168467 || | || || | ||| | | || | | ||||| |||||||||| || Sbjct 3654 GGGTGGAAAATGTGGCGCGTCAGAGCGGACATCATCGTGAAGATGTACCTCGGGCTAGCG 3713 Query 168468 GCATCCTTACCACCCATGAGACGCGTACCAAATTGACCACACGGTTCAAGAAGGTTAATG 168527 || || || ||| | ||||| |||||||| ||||||| ||| | ||| || |||||| Sbjct 3714 CTGTCTTTTCCTCCCGTAAGACGTGTACCAAACTGACCACCCGGATAAAGCAGATTAATG 3773 Query 168528 TTGTTTGAACCCGTGTAGTCGTTTGCCAACTTAACAATCGT-GTCCGCTAAGGATACTTC 168586 ||||| || |||| | |||||| || | ||||| | | | | ||| | || Sbjct 3774 TTGTTGCTTCCGACATAGTTCTGTGCCAAATTGATGATCGTCGAGCAC-AGGGACATCTC 3832 Query 168587 ACCATGGTGGTACGCAGACTTGTCCGCGACATATGCCGCCAGTTGTGCCACCTTCATTTC 168646 ||| ||||| || || ||| | |||||||| | | | ||| || |||||||||| || Sbjct 3833 ACCGTGGTGATAGGCGGACATCTCCGCGACTGAACCGGACAGCTGAGCCACCTTCACCTC 3892 Query 168647 ATCCTTGAGATTCTTATGGAAGCAAGCATACATCACTTTCCTCTG 168691 |||| || | |||||| | | ||| ||||||| ||| Sbjct 3893 GCGCTTGTCGTTACGCTTGAAGCACGTAAACAATACTTTCCGCTG 3937 Score = 84.2 bits (92), Expect = 3e-11 Identities = 140/197 (71%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 169340 AGCGTCGCGGACATTCTTACACTTCCCACGGAGAGGAAAGACGCCATA-GTGATCACGTC 169398 ||| |||||||| ||| | || || || |||||||| || || || ||| || || | Sbjct 4628 AGCTTCGCGGACGTTCAAAAGTTTACCTCGCAGAGGAAAAACACCGTACGTG-TCTCGAC 4686 Query 169399 CAACGACGGAGAGACCCGCGACCGCAAGGGTTTTCGCTGAATCACCCTCCGTGACAATGA 169458 |||| || | || | || || | ||||| ||||| || |||||||| | |||| Sbjct 4687 CAACAACTCCTAACCCTGAAACAGCCAACGTTTTGGCTGAGTCTCCCTCCGTTAGGATGA 4746 Query 169459 GGGTACACTTTCCAG-ATTGCGCCGTACCCGCCTTGTTTGCGTCGTCCAACTTGGGAATA 169517 ||||||| || | |||||| || ||| || | ||| ||||| |||||||| ||||| Sbjct 4747 GGGTACAATTCAATGAATTGCG-CGAACCAGCATCGTTGGCGTCCTCCAACTTAGGAATG 4805 Query 169518 CCAGTAATTTTGGACTT 169534 || | ||||| || || Sbjct 4806 CCCTTGATTTTCGATTT 4822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589604333251520