Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq11662 109 4e-18 seq50967 89.7 4e-12 seq20012 89.7 4e-12 seq2071 89.7 4e-12 >seq11662 Length=3363 Score = 109 bits (120), Expect = 4e-18 Identities = 123/165 (75%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 930666 GATTTTTCTTCACCAAATATTGCCAAAGAAATGCATATTGGACATTTGCGTTCTACCATT 930725 || ||||| ||||| || | || || ||||||||| |||||||||| || || || || Sbjct 2629 GACTTTTCCTCACCCAACGTCGCAAAGGAAATGCATGTTGGACATTTACGATCAACTATA 2688 Query 930726 ATTGGAGAATCTTTATGTAGATTATATGAATATTGTGGAAGTAAAGTTCATCGAGTCAAT 930785 ||||| || || | ||| | || ||||| | |||| | | |||| ||| | ||| Sbjct 2689 ATTGGTGATTCAATTTGTCGGTTCCTTGAATTTCTTGGACATGATGTTCTTCGTATAAAT 2748 Query 930786 CATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGCTTAT 930830 || || |||||||||||||| || ||||| ||||| |||||| || Sbjct 2749 CACATCGGTGATTGGGGAACTCAGTTTGGAATGTTGATTGCTCAT 2793 >seq50967 Length=297 Score = 89.7 bits (98), Expect = 4e-12 Identities = 110/148 (74%), Gaps = 2/148 (1%) Strand=Plus/Plus Query 563319 ATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTT 563378 |||||| || || |||||||| || ||||| | || ||||| || || ||||||||||| Sbjct 151 ATCTTCCAGCTGCTTTCCGGCGAAGATAAGACGCTGTTGATCTGGCGGGATTCCTTCTTT 210 Query 563379 ATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAA 563437 ||| ||||| ||| || || ||| || ||||| | || | || |||||||| | Sbjct 211 ATCCTGAATCTTTGCCTTGACGTTCTCGATCGTATC-GGATGGCTCCACCTCGAGAGTGA 269 Query 563438 CAGTTTTACCAGTAAGAGTTTTAACGAA 563465 ||||| || || |||||||| ||||| Sbjct 270 TCGTTTTGCCGGTCAGAGTTTTGACGAA 297 >seq20012 Length=3655 Score = 89.7 bits (98), Expect = 4e-12 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 563266 ACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCA 563325 || || ||||||||| ||| || |||||| || |||| | || | ||| || Sbjct 2504 ACCAGGTGAAGGGTAGATTCCTTCTGAATATTATAGTCAGACAACGTACGACCATCCTCC 2563 Query 563326 AGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGA 563385 || ||||| ||||| || || || | |||||||| || ||||| ||||||||||| || Sbjct 2564 AGCTGTTTGCCGGCGAAGATCAGACGCTGCTGATCTGGTGGAATACCTTCTTTATCCTGG 2623 Query 563386 ATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTA 563445 || ||| || || || || || |||| | | |||||||| | || || Sbjct 2624 ATCTTTGCCTTCACATTTTCGATGGTGTCAGAGGGCTCGACCTCGAGAGTTATGGTCTTC 2683 Query 563446 CCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||||| || ||||| |||||||| ||||| Sbjct 2684 CCAGTGAGCGTTTTGACGAAAATCTGCAT 2712 >seq2071 Length=4199 Score = 89.7 bits (98), Expect = 4e-12 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 370656 ACTGATGATGAAATTAAAAAAGCATACAAAAAACTAGCAATGAAATATCATCCTGATAGA 370715 || ||||| || |||||||| || ||| |||||| ||| | ||||||||||| |||| | Sbjct 3676 ACGGATGAAGATATTAAAAAGGCTTACCGAAAACTGGCACTAAAATATCATCCGGATAAA 3735 Query 370716 AACAAAAGTCCTGATGCTGAAGAAAAGTTTAA 370747 |||||| ||||| |||||||||||||| || Sbjct 3736 AACAAATCTCCTGGAGCTGAAGAAAAGTTCAA 3767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4026596351533520