Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq38620 123 5e-23 seq22528 113 8e-20 >seq38620 Length=1898 Score = 123 bits (136), Expect = 5e-23 Identities = 169/236 (72%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 ||||||||||| | ||||| |||||||| || ||| ||| |||| ||||| ||| Sbjct 38 CAGGCAAAGTCGCAGTGCAGTCCTTCGTCGCGCGAGATCAGCTCGTTCGAGAACGTGAGT 97 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 || ||||| | || | || || ||||||||||| ||||| ||| || ||| ||| Sbjct 98 CCTGGCATCAAGCCGCGCTTCTTAAGCCAGAAAATGGCCGCAAAACTACCGCTGAAAAAG 157 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 || |||||||| || ||||| || | || || || || || |||||| |||| Sbjct 158 ATACCCTCCACGGCAGCGAAGGCAACAACCCGTTCACCAAAGTTGGCCTTCTTGCTTGAG 217 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGC 48366 |||||| || ||||| || |||||||| || | ||| || | |||||| || || Sbjct 218 ATCCAGTTCAGAGCCCAATCGGCCTTCTTTTTCACGCACGGTAGCGTCTCGATCGC 273 Score = 114 bits (126), Expect = 2e-20 Identities = 180/258 (70%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 48400 AACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTG 48459 || ||| ||| || |||| || |||||| ||| ||| || || || || |||| ||| Sbjct 384 AATATACGTATCGATCAGCAGTGAGTACATTTCACTGTGGACGTTTTCCATCGCGACCTG 443 Query 48460 GAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAG 48519 ||| ||||||||| | ||| || |||||||| || | ||| | ||||| ||| Sbjct 444 GAAACCGTAGAAGCAGCGGGCTTCCGTAACCTGCACCTCCTGGCTGAACCGCTCCACCAG 503 Query 48520 ATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATG 48579 ||||| || || || ||||| ||||| |||||||| || || || || | ||| || Sbjct 504 GTTCTCGTTTACGATGCCATCCGAAGCGGCAAAGAATGCGAGCACGTGCGAGATGAAGTG 563 Query 48580 GCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTC 48639 |||||| | | | | | | |||| ||| | ||| || || ||||| ||||| Sbjct 564 ACGCTCGCTCGGCTTCAACGATTCCCAGTCCTTCATGTCCTTCGAGAGATCCACCTCTTC 623 Query 48640 CACAGTCCAGAAGGACGC 48657 ||| ||||||||||| || Sbjct 624 CACGGTCCAGAAGGATGC 641 >seq22528 Length=5949 Score = 113 bits (124), Expect = 8e-20 Identities = 101/127 (80%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 241497 CCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGG 241556 ||||||| ||||||||| || |||||||||| | || ||||| ||||| || | || Sbjct 3717 CCTTCACGCGATCCTCCAGCTTCGAGATGCGTTCCGGCTTCCGCCGCCGGCACTTTGAGG 3776 Query 241557 CTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGT 241616 | |||| |||||||| || | ||| |||||| ||||||||||||||| |||||||| Sbjct 3777 CGGCCACCCGGTTCCGTAGGCGCTTCCGTTCCAGCTTGATGCGTTCCTGAGACTCCATGT 3836 Query 241617 CGATCGG 241623 ||||||| Sbjct 3837 CGATCGG 3843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 930938388920320