Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq38620 123 5e-23 seq1636 114 2e-20 >seq38620 Length=1898 Score = 123 bits (136), Expect = 5e-23 Identities = 176/248 (71%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 25786 CTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAG 25845 |||||| || |||||| |||| || | || | |||||| ||||| |||| Sbjct 282 CTGTTTAACGCGATCGAGACGCTACCGTGCGTGAAAAAGAAGGCCGATTGGGCTCTGAAC 223 Query 25846 TGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAG 25905 |||||| ||| ||| || | ||||| || ||| | || ||||| ||||| |||||| Sbjct 222 TGGATCTCAAGCAAGAAGGCCAACTTTGGTGAACGGGTTGTTGCCTTCGCTGCCGTGGAG 163 Query 25906 GGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATG 25965 || ||||||||||||||| ||||||||||| |||||||| ||| || || ||| Sbjct 162 GGTATCTTTTTCAGCGGTAGTTTTGCGGCCATTTTCTGGCTTAAGAAGCGCGGCTTGATG 103 Query 25966 CCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTT 26025 || || || || || |||||||| ||| | ||||| || || ||| | || ||| Sbjct 102 CCAGGACTCACGTTCTCGAACGAGCTGATCTCGCGCGACGAAGGACTGCACTGCGACTTT 43 Query 26026 GCCTGCCT 26033 ||||| || Sbjct 42 GCCTGTCT 35 Score = 105 bits (116), Expect = 1e-17 Identities = 163/229 (71%), Gaps = 8/229 (3%) Strand=Plus/Minus Query 25512 CTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTA--CGCTCTATCC 25569 |||||||| |||||| | ||||| | ||||||||| | | |||| | || | | || Sbjct 633 CTGGACCGTGGAAGAGGTGGATCTCTCGAAGGACATGAAGGACTGGGAATCGTTGAAGCC 574 Query 25570 AAAGACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATA 25629 | ||||| || || || | ||||| | ||||||||||| || || ||||| || Sbjct 573 GAG--CGAGCGTCACTTCATCTCGCACGTGCTCGCATTCTTTGCCGCTTCGGATGGCATC 516 Query 25630 GTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAG--TACGTGGAGGCCAAGT 25687 || |||||||| ||| ||| | |||| | ||| |||||| |||| || ||| | Sbjct 515 GTAAACGAGAACCTGGTGGAGCGGTTCAGCCAGGAGGTGCAGGTTACG--GAAGCCCGCT 458 Query 25688 GTTTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTA 25736 | ||||||||||||||| | || || ||||| || ||| ||| |||| Sbjct 457 GCTTCTACGGTTTCCAGGTCGCGATGGAAAACGTCCACAGTGAAATGTA 409 >seq1636 Length=7642 Score = 114 bits (126), Expect = 2e-20 Identities = 596/932 (64%), Gaps = 38/932 (4%) Strand=Plus/Minus Query 221357 ACCGGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGC 221416 ||||| || || ||||||| |||||| || |||| | | ||| |||| | || Sbjct 5416 ACCGGGCTACCTTCGTACGTCTCGTATGGTCCGTCACGGGCAGCCAACTCGCA-GCTAGC 5358 Query 221417 GTC-AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGG 221475 || | |||| ||| |||||| || ||||| || || |||||| | | |||||| Sbjct 5357 CTCCAAGGCACCGTAGTAGATTGTTTCAAACATTTGCTGATTGAGTTTTTGGGCCTCCTC 5298 Query 221476 AGAAGTGAA-GGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATAC 221534 | | | ||| || |||| || ||| | ||||||| || || || || |||| Sbjct 5297 ACTCTCGTATGGGTAT-CGCATCAGGATAAACGCATCGGCCATACCTTGCACACCAATAC 5239 Query 221535 CGATGGGCCTGTGTCTCCTGTTGGAAGCGGC-CGCTTCTGGCACGGGATAAAAGTTGACG 221593 ||||||||||||| | | |||| ||| || | ||| || || || ||||| |||||| | Sbjct 5238 CGATGGGCCTGTGGCGCATGTTCGAA-CGACGCGCCTCCGGAACCGGATAGTAGTTGATG 5180 Query 221594 TCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGA 221653 ||||| | ||||| | ||| | || | | ||| | || || |||| || Sbjct 5179 TCGATGATTTTGTTCAAGTTTCGCGTTACGGTCTTAGCGACATCTTTCAGTTTGC----- 5125 Query 221654 TTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTC-CACAAAAGCGTTTAGGGCAA-CGC 221711 | || ||| ||| || | || |||||| ||||| || | || Sbjct 5124 -------CAAAATCGTA--CGTAC--GATCCGATCTCACAAACATGTTTAACGCGATCGA 5076 Query 221712 TGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGA 221771 || | || || |||||||| | ||||||||| | |||| | |||||| || || | Sbjct 5075 TG-CAAGATTGCACACGGCAATCTCGTCCTTTGAAGAGTACTCCACGATCTCCGTGCAAA 5017 Query 221772 GGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCT 221831 |||| |||||| || || |||| || | || || ||| || || || |||| Sbjct 5016 GGTTTGAGCACTTTATTGTGCCCACGTTTTGCTGGTTGCTCTTTCGGTTACACGCATCCT 4957 Query 221832 TGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTC---CCAGA 221888 |||| ||||| | || |||| || |||| ||| | | ||| || | ||| | Sbjct 4956 TGTACAGCATGTACGGCACGCCGGTTTCCACCTGTGATTC---AATTATGGCAAACCACA 4900 Query 221889 GTTCTCTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAG 221947 | || ||| || | || | | | ||| || ||| || || || || Sbjct 4899 GGTC-CTGCGCCTTTACTTGGCGAATAAAGCGACCTTC---CTTCTCGTAGCCCTCGTAC 4844 Query 221948 AGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACAC-CTGGCGGGACACAT 222006 | | || |||| ||| || ||| || || || || || | ||||| ||||| Sbjct 4843 CGTTTCTCGAACTCTTCGCCCCACGAATCAGACAATCCGGGGCAATCATGCGGG-CACAT 4785 Query 222007 CAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGC 222066 |||||||| | ||| | | || | || |||||| | ||||| ||||| || || Sbjct 4784 AAGACTCCACATTTCGTTAGCCTCCACTCGCTTCATGAATAAATCCGGTATCCAAAGGGC 4725 Query 222067 CTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAA 222126 | || | |||| | || ||||||| || |||| || ||||||| | ||| Sbjct 4724 ATAGAACATGTCTCGCGCACGTACCTCCTCCTTCCCTGTGTTCTTTTTCAGATCGAGAAA 4665 Query 222127 CTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTT 222186 ||| || | ||| |||||||||||||||| |||| || | || ||||||||||| || Sbjct 4664 CTCGAACACATCACCGTGCCACGGCTCCAGGTAGATTGCAAATGCTCCGGGTCGCTTATT 4605 Query 222187 GCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCC 222246 ||| || ||||| || || | || ||| | | |||||| |||| |||| || Sbjct 4604 GCCTCCTTGATCGACGTACCGCGCCGTGTTATTGTACACGCGAAGCATCGGCACCAAACC 4545 Query 222247 GTTGGATCGACCGTTGGTGCCCTTAATGTACG 222278 ||||| || || |||||| ||||||| Sbjct 4544 ATTGGAGATTCCATTTGTGCCCGCGATGTACG 4513 Score = 84.2 bits (92), Expect = 4e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 221117 TTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGT 221176 ||||||||||| || |||||||| || || | ||| | || | ||| || ||| ||||| Sbjct 5647 TTCACCACTTGAAATTCTCCCGACAGGACGCGCCTATTATAAACGTTCGATGTGTACGGT 5588 Query 221177 TCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACC 221236 |||| | ||| |||||||||| || || || || || || ||||| ||||||| | Sbjct 5587 TCGAAGGACTCATTGTTGCCCAAAATTTGTGCGGTTGAAGCCGTCGGCATCGGTGCCAAC 5528 Query 221237 AGCAGACTGTTGCG 221250 || ||| ||||| Sbjct 5527 AGTAGAGAATTGCG 5514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928252104133120