Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq11662 123 2e-22 seq20890 93.3 3e-13 seq2868 89.7 3e-12 >seq11662 Length=3363 Score = 123 bits (136), Expect = 2e-22 Identities = 125/163 (77%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 817098 TAGATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCTACAA 817157 |||| ||||| || || || | ||||||||||||||| ||||||| || |||| || | Sbjct 2627 TAGACTTTTCCTCACCCAACGTCGCAAAGGAAATGCATGTTGGACATTTACGATCAACTA 2686 Query 817158 TAATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATGTGAAGTACAAAGAATAA 817217 |||||||||| || ||||| | | ||||||| |||| ||| || | | |||| Sbjct 2687 TAATTGGTGATTCAATTTGTCGGTTCCTTGAATTTCTTGGACATGATGTTCTTCGTATAA 2746 Query 817218 ATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGC 817260 |||| || |||||||||||||| || ||||| ||||| ||||| Sbjct 2747 ATCACATCGGTGATTGGGGAACTCAGTTTGGAATGTTGATTGC 2789 >seq20890 Length=2679 Score = 93.3 bits (102), Expect = 3e-13 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| || || || || |||||||| || || || || || ||||||| || || Sbjct 1415 ACGCAGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGAATGTTGTAATCAGACAGCGT 1474 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | || || || ||||| || || ||||| ||||| || ||||| || || || || Sbjct 1475 GCGTCCGTCCTCCAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGATCTGGGGGGATACC 1534 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||| || ||||| ||| ||| || || ||||| | | || | ||||| Sbjct 1535 CTCCTTGTCCTGGATCTTGGCTTTCACATTCTCGATCGTATCCGAGGGTTCAACCTCAAG 1594 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||||| || ||||| ||||| || || ||||| || || Sbjct 1595 GGTAATGGTCTTACCCGTGAGGGTTTTCACGAAGATCTG 1633 >seq2868 Length=1316 Score = 89.7 bits (98), Expect = 3e-12 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || || || || || || || || || ||||| ||||||||||| || || |||| Sbjct 514 ATGCCGTCATCACCGTGCCGGCGTACTTCAACGATTCGCAACGTCAAGCGACCAAGGATG 455 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | || ||||| ||||| || || | ||||| ||||| ||||| || || || || Sbjct 454 CTGGTGCCATTGCGGGTCTAAACGTGCTGCGTATCATTAACGAACCGACGGCGGCGGCCA 395 Query 474855 TTGCTTATGGTCTTGATAAGAA 474876 |||| || || || |||||||| Sbjct 394 TTGCGTACGGGCTGGATAAGAA 373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3265989503595104