Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq9597 98.7 3e-15 seq29 84.2 6e-11 >seq9597 Length=9253 Score = 98.7 bits (108), Expect = 3e-15 Identities = 180/264 (68%), Gaps = 0/264 (0%) Strand=Plus/Plus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| |||||||| |||||| || || ||||||||| | || || || || ||| Sbjct 7031 TCCATAGCCTTGATTAGACGACGTTGGATGTAACCAGTTTCGGCCGTCTTGACGGCGGTA 7090 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCC 302694 || || | ||| | ||||| ||||| || |||||| | | ||| ||| || ||| Sbjct 7091 TCGATCAAACCCTCGCGACCGCCCATGGCGTGGAAGTAGAACTCGGTCGGCGTTAACCCA 7150 Query 302695 CCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAG 302754 ||| | ||| | || |||||||| |||| |||||| || || ||| | ||| Sbjct 7151 GCAAGGTACGAGTTTTCCACGAAACCTCGCGACTCGGGACCATAATCATCTTTGATGAAG 7210 Query 302755 TGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGT 302814 || |||| || | || | | || | || || ||||| || || ||||||||||| Sbjct 7211 TGAGGCAATGTGCGCTTGCGAAAACCAAACGGTATGCGCTTACCTTCGACGTTCTGCTGA 7270 Query 302815 CCCAGGCACGAAATCATCTGCGAA 302838 || | || | ||| | ||| ||| Sbjct 7271 CCGACACAAGCAATAACCTGAGAA 7294 >seq29 Length=5324 Score = 84.2 bits (92), Expect = 6e-11 Identities = 95/127 (75%), Gaps = 3/127 (2%) Strand=Plus/Plus Query 301815 AATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAA 301874 |||||| | ||||| || || || | |||| ||| | |||| ||||||||||| || Sbjct 1194 AATTTCGACTATACGCGGCACTCCTTGTGTTATGTT---CATGGATGCAACACCAGCGAA 1250 Query 301875 GTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCAT 301934 ||| ||||| |||| ||| | ||| ||| |||||||| || |||||||| || | | Sbjct 1251 GTGAAAAGTTTTCAAAGTCATTTGCGTACCAGGCTCACCGATGCTTTGTGCTGCCAGCGC 1310 Query 301935 ACCAACC 301941 ||||||| Sbjct 1311 ACCAACC 1317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1470854954019176