Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1636 410 1e-109 seq20012 154 1e-32 seq50967 145 7e-30 seq20890 132 4e-26 seq3519 125 6e-24 seq42053 111 1e-19 >seq1636 Length=7642 Score = 410 bits (454), Expect = 1e-109 Identities = 1205/1825 (66%), Gaps = 55/1825 (3%) Strand=Plus/Minus Query 138151 GATTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATT 138210 ||||| || || || |||| ||||| | | || || || || | || || ||||| Sbjct 5998 GATTTGTCCACCGTGAACTGAATGGCGTTTACCGCCGGCTTGGTACGCAAGTAGTACATG 5939 Query 138211 CCCGTTTTTAA-CCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGT 138269 |||||||| | ||||| |||| || |||| | || ||||| || || | ||| | Sbjct 5938 CCCGTTTTAAGGCCCATCTTCC-AGCCGTAGAAATGGATCGATGTCAGCTTGCCATAATT 5880 Query 138270 CGGTTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAAT 138329 ||||| |||| ||||| ||||| || ||||| || || || ||||| || Sbjct 5879 CGGTTCAGCCACGTGAATGTTGAACGACTGTGATTGATCTATAAACGCTCCTCGGTCGGC 5820 Query 138330 GGCCATGTTAATTAAA-TTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAA 138388 |||||| || || || |||||||| | |||||||| || || ||||| | ||||||| Sbjct 5819 GGCCATCTTGATGGAAGTTTTTACTGAT-ATCTCCCAGACCGTTTTGTAAATGTCACGAA 5761 Query 138389 TATGTCGCGGTATTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTTC 138448 | | | | || ||| | ||| || || || |||||| ||| | || || | || Sbjct 5760 TCTCTTGGGGAATTTCCGTAATTTTCTGGATCGATCCGTTGTGCGCCAGAATTCGGTGTC 5701 Query 138449 TCATGTCATCGTTGTACAGATTCA-ACTTGATCAAGTCGTTTATCAGATATCTGTTTATG 138507 |||| ||||||| ||| | || ||| ||||||| || | |||| || | Sbjct 5700 TCATATCATCGTCCCACA-AGCCACACTCCGTCAAGTCCTTCAGGAGATGGTGATTCACC 5642 Query 138508 ACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAAC 138567 || |||||||| || | || || || | | |||| ||| ||| | || || || Sbjct 5641 ACTTGAAATTCTCCCGACAGGACGCGCCTATTATAAACGTTCGATGTGTACGGTTCGAAG 5582 Query 138568 GATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGA 138627 || || ||||| |||| ||| || || || | || |||||||| |||| || ||| Sbjct 5581 GACTCATTGTTGCCCAAAATTTGTGCGGTTGAAGCCGTCGGCATCGGTGCCAACAGTAGA 5522 Query 138628 GAATTCCGTAAACCGTGAAGCTTG--ATTCGT-TCCTTGAGCGACGACCAGTCCCACAAA 138684 ||||| || | || || |||| | || | || || | || ||||| ||||| Sbjct 5521 GAATTGCGAATGCCATG---CTTGGCAATCTTCTCTTTCAATTCCGCCCAGTTCCACAGG 5465 Query 138685 TCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCT 138744 || ||||| | |||||||||||||||||||| || || ||| ||| | || || ||| Sbjct 5464 TCCGTAGGTGTCTTGTTCCACATATCGTACTGCAAGATACCCTTGCTTACCGGGCTACCT 5405 Query 138745 TCGTACGAATCGTATACACCAAACTCTTGC-GCCAACTCGTTGCTCGCCTCGAGCGCACC 138803 ||||||| |||||| || | | || ||||||||| ||| ||||| | ||||| Sbjct 5404 TCGTACGTCTCGTATGGTCCGT-CACGGGCAGCCAACTCGCAGCTAGCCTCCAAGGCACC 5346 Query 138804 ATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGG 138863 ||||| || ||||| || ||||||||||| | ||||||| | |||||||| || Sbjct 5345 GTAGTAGATTGTTTCAAACATTTGCTGATTGAGTTTTTGGGCCTCCTCACTCTCGTATGG 5286 Query 138864 CATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATG 138923 || | || | ||||| ||||||| |||||||| || | |||| || | || Sbjct 5285 GTATCGCATCAGGATAAACGCATCGGCCATACCTTGCACACCAATACCGATGGGCCTGTG 5226 Query 138924 GCGCAGATTTG-ACGCTTTTGCGGCTTCG--ATAGGATAATAGTTTACATCGATGATTTT 138980 ||||| || | ||| ||| || || | ||||| ||||| | ||||||||||| Sbjct 5225 GCGCATGTTCGAACG---ACGCGCCTCCGGAACCGGATAGTAGTTGATGTCGATGATTTT 5169 Query 138981 GTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTT---CAAAATCGTATGT 139037 ||| || |||||| || ||||| || |||| | ||| |||||||||| || Sbjct 5168 GTTCAAGTTTCGCGTTACGGTCTTAG-CGACATCTTTCA--GTTTGCCAAAATCGTACGT 5112 Query 139038 GCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCA 139097 || | ||| || ||||| |||| | ||||| || | ||||| Sbjct 5111 ----ACGAT-------CCGATCTC-ACAAACATGTTTAACGCGATCGATGCAAGATTGCA 5064 Query 139098 CACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTT 139157 ||| || | ||||| ||| || || || || | || | || ||||| Sbjct 5063 CACGGCAATCTCGTCCTTTGAAGAGTACTCCACGATCTCCGTGCAAAGGTTTGAGCACTT 5004 Query 139158 GATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATA 139217 || || || | ||||| || ||||| ||||||||||| ||||| ||||| ||||| || Sbjct 5003 TATTGTGCCCACGTTTTGCTGGTTGCTCTTTCGGTTACACGCATCCTTGTACAGCATGTA 4944 Query 139218 CGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGCTTGTAT 139277 ||| ||| |||||||| |||| || || ||| ||| |||| || | || Sbjct 4943 CGGCACGCCGGTTTCCACCTGTGATTCAATTATGGCAAACCACAGGTCCTGCGCCTTTAC 4884 Query 139278 TTGACGCACGTAAA--GTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCA 139335 ||| || | |||| | | || |||||| ||||| ||| ||||| ||| Sbjct 4883 TTGGCGAA--TAAAGCGACCTTCCTTCTCGTAGCCCTCGTACCGTTTCTCGAACTCTTCG 4826 Query 139336 CCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTC 139395 || | | ||||| | || | || | | || ||||| || ||| | |||| Sbjct 4825 CCCCACGAATCAGACAATCCGGGGCAATCATGCGGGCACATAAGACTCCACATTTCGTTA 4766 Query 139396 GCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCC 139455 |||| || ||| ||||||| | |||||| ||| ||||| | | || | || | ||| Sbjct 4765 GCCTCCACTCGCTTCATGAATAAATCCGGTATC--CAAAGGGCATAGAACATGTCTCGCG 4708 Query 139456 TTCTTA--TCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGT 139513 | || || ||| || |||| ||||| | || || || || || ||| ||| Sbjct 4707 CACGTACCTCCTCCTTCCCTGTGTTCTTTTTCAGATCGAGAAACTCGAACACATCACCGT 4648 Query 139514 GCCATGGTTCCAGATAGATGGCCATTGCGCC---TTTCCGTTTGCCACCTTGATCGACGT 139570 |||| || ||||| ||||| || | ||| || | | ||||| ||||||||||||| Sbjct 4647 GCCACGGCTCCAGGTAGATTGCAAATGCTCCGGGTCGCTTATTGCCTCCTTGATCGACGT 4588 Query 139571 GTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGG 139630 || | | |||||| | ||||| | ||||||| ||| ||| | | |||| || | Sbjct 4587 ACCGCGCCGTGTTATTGTACACGCGAAGCATCGGCACCAAACCATTGGAGATTCCATTTG 4528 Query 139631 TGCTACGGATGGGACTGTTGC--GAGCTCGGACGTCATGTACATTGATGCCGATTCCGCC 139688 ||| ||| | || ||| | || |||| ||| || || | || || || || Sbjct 4527 TGCCCGCGAT-GTAC-GTTCCCTTCGCACGGATACAATGCACGTTCAGCCCAATGCCACC 4470 Query 139689 GCCAAATTTGGATATTAAAACGCAATCGCGTAATGTCTCGTATATACCTCTTATGCTGTC 139748 | | | || ||||| | |||| | | || ||||| ||||| |||||||| Sbjct 4469 GGCTGACTTTGATATCAGGGCGCACTGTTTCAGCGTATCGTAGATACCGTCAATGCTGTC 4410 Query 139749 GTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAA 139808 ||| |||||| | ||| ||||| || ||||| ||||| ||| || | || ||||| Sbjct 4409 GTCGGACATCGTCAACAGGAAGCAGGAAGAAAGCTGCGGACGTTGTGTCGCCGCAGCAAA 4350 Query 139809 CAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGATGGC 139868 || ||| ||| || || ||||| | | | | ||||| || | |||||| |||||||| Sbjct 4349 CATAGTTGGAGAAGCATGGGTGAAAAATCGCTCCGACAGCAGATTGTACGTCTCGATGGC 4290 Query 139869 GCTCA-CAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGGATCC 139927 | || | |||||| ||||| ||||||| | || |||||||||||||| ||| | Sbjct 4289 -CGCATCGATATCCTCGCCGTGAATACCGATGGCAACGCGCATCAGCATATGCTGGGGAC 4231 Query 139928 GTTCGGCCACCGCGCCCTCGATTTT 139952 ||||| | | | ||||| ||||| Sbjct 4230 GTTCGACGATCTTGCCCTTAATTTT 4206 >seq20012 Length=3655 Score = 154 bits (170), Expect = 1e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || | |||||||| || || || || || || ||||| || || || | Sbjct 2713 GATGCAGATTTTCGTCAAAACGCTCACTGGGAAGACCATAACTCTCGAGGTCGAGCCCTC 2654 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | |||| || || ||||||||| || |||||||| || || || ||||| Sbjct 2653 TGACACCATCGAAAATGTGAAGGCAAAGATCCAGGATAAAGAAGGTATTCCACCAGATCA 2594 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| ||||||| ||||| ||||||||||||||| | | |||| || ||||| Sbjct 2593 GCAGCGTCTGATCTTCGCCGGCAAACAGCTGGAGGATGGTCGTACGTTGTCTGACTATAA 2534 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| |||||||| || || ||| ||||||||||| | || || || Sbjct 2533 TATTCAGAAGGAATCTACCCTTCACCTGGTGTTGCGACTTCGTGGTGG 2486 >seq50967 Length=297 Score = 145 bits (160), Expect = 7e-30 Identities = 162/214 (76%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA-CCGACACAGTAGAAAC 24777 ||||| || ||||| ||||| || || ||||| || || |||| |||| || | || | Sbjct 291 AAAACTCTGACCGGCAAAACGATCACTCTCGAGGTGGA-GCCATCCGATACGATCGAGAA 233 Query 24778 GGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTT 24837 || || |||||| || || ||||||||||| || || |||||||| ||| | ||||| Sbjct 232 CGTCAAGGCAAAGATTCAGGATAAAGAAGGAATCCCGCCAGATCAACAGCGTCTTATCTT 173 Query 24838 TGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATC 24897 ||||| || |||||||| ||| | | | |||| ||||| ||||| || || ||||| Sbjct 172 CGCCGGAAAGCAGCTGGAAGATGGTCGCACCTTGTCGGATTACAACATCCAGAAAGAATC 113 Query 24898 GACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||| || || ||||||||||| |||| |||||| Sbjct 112 GACTCTGCATTTGGTGTTGCGTCTGCGAGGAGGC 79 >seq20890 Length=2679 Score = 132 bits (146), Expect = 4e-26 Identities = 171/233 (73%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | ||||| || || ||||| || ||||| || || || ||| || | Sbjct 1637 GATGCAGATCTTCGTGAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTTGAACCCTC 1578 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || | || ||| |||||||| ||||| || || || || || ||||| Sbjct 1577 GGATACGATCGAGAATGTGAAAGCCAAGATCCAGGACAAGGAGGGTATCCCCCCAGATCA 1518 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA---TGTCAGATTA 24879 || ||| |||| || ||||| || ||||||||||| || || || |||| ||||| Sbjct 1517 GCAGCGTCTGATTTTCGCCGGCAAGCAGCTGGAGGA--CG-GACGCACGCTGTCTGATTA 1461 Query 24880 TAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932 |||||||| ||||| ||||| || || ||||| | || |||| || |||| Sbjct 1460 CAACATTCAGAAGGAGTCGACCCTTCATCTGGTGCTTCGCCTGCGTGGTGGCG 1408 >seq3519 Length=1813 Score = 125 bits (138), Expect = 6e-24 Identities = 147/196 (75%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 24736 AACTATTACGCTCGAAGTAGAAGCCA-CCGACACAGTAGAAACGGTAAAACAAAAGATCC 24794 ||| || || ||||| || || |||| |||| || | || | || || |||||| | Sbjct 1813 AACGATCACTCTCGAGGTGGA-GCCATCCGATACGATCGAGAACGTCAAGGCAAAGATTC 1755 Query 24795 AAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGG 24854 | || || |||||||| || || |||||||| ||| | ||||| ||||| || ||||||| Sbjct 1754 AGGATAAGGAAGGAATCCCGCCAGATCAACAGCGTCTTATCTTCGCCGGAAAGCAGCTGG 1695 Query 24855 AGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGT 24914 | ||| | | | |||| ||||| ||||| || || |||||||| || || ||||||| Sbjct 1694 AAGATGGTCGCACCTTGTCGGATTACAACATCCAGAAAGAATCGACTCTGCATTTGGTGT 1635 Query 24915 TGCGATTGCGCGGAGG 24930 |||| ||||| ||||| Sbjct 1634 TGCGTTTGCGAGGAGG 1619 >seq42053 Length=1259 Score = 111 bits (122), Expect = 1e-19 Identities = 166/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 24695 ATTGATACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTA 24754 ||| ||| ||||||||||| | || || || || || || || || || || || || Sbjct 1000 ATTTATAGTATGCAGATCTTCGTGAAGACTCTGACTGGCAAGACCATCACTCTGGAGGTC 1059 Query 24755 GAAGCCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCT 24814 || | | || || | || | || ||| |||||||| ||||| ||||| || || Sbjct 1060 GAGCCTTCGGATACTATCGAGAATGTGAAAGCTAAGATCCAGGACAAGGAAGGCATTCCC 1119 Query 24815 CCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCA 24874 || ||||| || ||||||||||| || || || ||||| ||||| | | | |||| Sbjct 1120 CCAGATCAGCAGCGTTTGATCTTCGCTGGCAAGCAGCTTGAGGACGGACGCACCCTGTCC 1179 Query 24875 GATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || |||||||| ||||| ||||| | |||||||| | || |||| || || Sbjct 1180 GACTACAACATTCAGAAGGAGTCGACCTTGCACTTGGTCCTTCGTCTGCGTGGTGG 1235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449610520341440