Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq50967 109 5e-19 seq9043 98.7 8e-16 >seq50967 Length=297 Score = 109 bits (120), Expect = 5e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 110282 TTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGACGATACTGTC 110341 || ||||||||| | ||||||||||| || || |||| |||||| |||||| || Sbjct 297 TTCGTCAAAACTCTGACCGGCAAAACGATCACTCTCGAGGTGGAGCCATCCGATACGATC 238 Query 110342 GGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTT 110401 | | || || |||||| || |||||||| | || |||||||| | ||| Sbjct 237 GAGAACGTCAAGGCAAAGATTCAGGATAAAGAAGGAATCCCGCCAGATCAACAGCGTCTT 178 Query 110402 ATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTCAAAAA 110461 || | || || || |||||||| |||| | || || ||||||||||||| || ||| Sbjct 177 ATCTTCGCCGGAAAGCAGCTGGAAGATGGTCGCACCTTGTCGGATTACAACATCCAGAAA 118 Query 110462 GAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| || |||| ||||||| | |||||||| || Sbjct 117 GAATCGACTCTGCATTTGGTGTTGCGTCTGCGAGGAGG 80 >seq9043 Length=5722 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATAA 34263 || ||||| || | ||||| ||||| | |||||| | | |||| || || | Sbjct 5028 GGTGGGTTCTTGATGATGAACGTGTTCACCTTATGGTTCACCTCCAGCGGACCATGGAAG 4969 Query 34264 CCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGTC 34323 || || || ||||| || || || | ||||| | ||||| | || || ||| Sbjct 4968 CCACAGGCCTTGCATCCTTGCGCAATGGTACCTTTTTTCGACGACACAAGTAGGTCCGTC 4909 Query 34324 TCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTCC 34383 || ||||||||||| ||||| |||| ||| |||||||| || || ||||| ||||| || Sbjct 4908 TCTGGGTTGTCACACTCCGGGCACAGCACGAACTTGCGAATAAACCCATCCAGCAGATCT 4849 Query 34384 TGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430 || ||||| | | || || || |||||||| || || ||||| || Sbjct 4848 TGCAACTTGGCAGCATCATGCGATCCGTTGACAATAAAGCGTTCATT 4802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412584751630664