Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq2949 127 4e-24 >seq2949 Length=10021 Score = 127 bits (140), Expect = 4e-24 Identities = 211/294 (72%), Gaps = 8/294 (3%) Strand=Plus/Minus Query 182995 CTCGAAAAGGCAGAAACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGA 183054 || |||| ||| ||||||| ||| | ||||| | | || |||||||| | | Sbjct 9248 CTTGAAACGGCCAAAACACACGACGACTTGTGGAACTCGGCTCAGCTACAGATGGTAAAG 9189 Query 183055 GAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACA 183114 ||||| |||||||| | || | |||||||||||||| || || || || |||||||| Sbjct 9188 GAAGGCAAAATGCACGGCTTCCTGCGAATGTACTGGGCGAAGAAAATCCTCGAATGGACC 9129 Query 183115 AGAACTCCGGAAGATGC-TTTGAGTTATAGTATCTATATGAACAATAAGTACGAACTAGA 183173 | ||| || ||||| || | || | | |||||| ||||| | |||| || || Sbjct 9128 AAAACGCCTGAAGAGGCGCTCGAATCA-GCCATCTATCTGAACGACCGGTACAGTCTCGA 9070 Query 183174 CGGTACG-GATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGAT-TACACGAT 183231 || ||| ||||| ||||| ||||| || ||||||||||| | | |||| | | || ||| Sbjct 9069 TGG-ACGCGATCCAAACGGGTACGTTGGCTGTATGTGGTCGA-TCGCGGGTATCCATGAT 9012 Query 183232 -AGAGCGTGGAAAGAAAGACCTATATTTGGAAAGATAAGATATATGAATTATGA 183284 || || |||||||| | ||||||||||||||| |||| ||||| || || Sbjct 9011 CAGGGC-TGGAAAGAGCGCGATATATTTGGAAAGATTCGATACATGAACTACGA 8959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 902834733313280