Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1636 394 9e-105 seq38620 127 2e-24 seq50967 125 7e-24 seq20890 120 3e-22 seq42053 114 1e-20 seq20012 104 2e-17 seq41025 89.7 5e-13 >seq1636 Length=7642 Score = 394 bits (436), Expect = 9e-105 Identities = 1206/1833 (66%), Gaps = 41/1833 (2%) Strand=Plus/Minus Query 147943 CGGGTTGAGTGCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGCCATGCGTAGTCGT 148002 ||| ||| || |||| |||||||||||||| || |||||||| ||| ||||| | Sbjct 5963 CGGCTTG-GTACGCAAGTAGTACATGCCCGTTTTAAGGCCCATCTTCCAGCCGTAGAAAT 5905 Query 148003 GCACCGACGACATGAGCGTG---TACGTCGGGTGCGGCACAAACAGATTAAACGACTGGC 148059 | | ||| | || || || || |||| | | ||| | || |||||||| Sbjct 5904 GGATCGATGTCA---GCTTGCCATAATTCGGTTCAGCCACGTGAATGTTGAACGACTGTG 5848 Query 148060 TCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGCTTTATCTTC-ATC 148118 || || || ||||| || ||||| |||||||| | ||| | | ||| || ||| Sbjct 5847 ATTGATCTATAAACGCTCCTCGGTCGGCGGCCATCTTGATG-GAAGTTTTTACTGATATC 5789 Query 148119 TCCCAGGCCGTCTTGTACA-GCCGCTTGATATGATCGGGAATG-CCGTCGATGCGCTGCA 148176 |||||| |||| ||||| | | | | || | | |||||| |||| || ||| | Sbjct 5788 TCCCAGACCGTTTTGTAAATGTCACGA-ATCTCTTGGGGAATTTCCGTA-ATTTTCTGGA 5731 Query 148177 CCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGA 148236 ||| ||| |||||| | ||| | | | ||| || || | | | ||| Sbjct 5730 TCGATCCGTTGTGCGCCAGAATTCGGTGTCTCATATCATCGTCCCACAAGCCACACTCCG 5671 Query 148237 TCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCA 148296 ||| ||| | | |||| ||||||||||| ||||| || || | || ||||||| Sbjct 5670 TCAAGTCCTTCAGGAGATGGTGATTCACCACTTGAAATTCTCCCGACAGGACGCGCCTAT 5611 Query 148297 GATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCG 148356 ||| ||||| || ||||||| || ||||| |||||||||||||| || ||||| | Sbjct 5610 TATAAACGTTCGATGTGTACGGTTCGAAGGACTCATTGTTGCCCAAAATTTGTGCGGTTG 5551 Query 148357 TTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGC 148416 ||||| ||||| || | ||| || || ||||| | || | || || || Sbjct 5550 AAGCCGTCGGCATCGGTGCCAACAGTAGAGAATTGCGAATGCCATGCTTGGCAATCTTCT 5491 Query 148417 GCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCA 148476 |||| ||||||||| ||| || || |||||| ||||||||| |||||||||| Sbjct 5490 CTTTCAATTCCGCCCAGTTCCACAGGTCCGTAGGTGTCTTGTTCCACATATCGTACTGCA 5431 Query 148477 GAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCA 148536 || || ||| | ||||| || ||||||| ||| ||||||| || |||| Sbjct 5430 AGATACCCTTGCTTACCGGGCTACCTTCGTACGTCTCGTATGGTCCGTCACGGGCAGCCA 5371 Query 148537 GTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCA 148596 |||||||| ||||| | || |||||||| || || || |||||| ||||| Sbjct 5370 ACTCGCAGCTAGCCTCCAAGGCACCGTAGTAGATTGTTTCAAACATTTGCTGATTGAGTT 5311 Query 148597 GCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCT 148656 ||| ||| || ||||| || |||| | | | |||||| ||||| | || | Sbjct 5310 TTTGGGCCTCCTCACTCTCGTATGGGTATCGCATCAGGATAAACGCATCGGCCATACCTT 5251 Query 148657 GTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCG-AGCGGA 148715 | || || | || ||||||| ||| ||||| || | ||||| ||| | | |||| Sbjct 5250 GCACACCAATACCGATGGGCCTGTGGCGCATGTTCGAACGACGCGC-CTCCGGAACCGGA 5192 Query 148716 TAGTGGTTGCGGTCGATGATCTTG-TCAAGATTGCGCACCACCACCTTTG-TAATTCTGC 148773 |||| |||| ||||||||| ||| ||||| || ||| || ||| | | ||| Sbjct 5191 TAGTAGTTGATGTCGATGATTTTGTTCAAG-TTTCGCGTTACGGTCTTAGCGACATCT-T 5134 Query 148774 GCAGCAATTCAAAATCGTACTT---GTC--ATCTACGATGCATCGGTTCACGGCGATAGA 148828 ||| ||||||||||| | || |||| | ||| ||| | ||||| || Sbjct 5133 TCAGTTTGCCAAAATCGTACGTACGATCCGATCTCACAAACAT--GTTTAACGCGATCGA 5076 Query 148829 GGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAG 148888 || |||||||||||||| |||| ||| | |||||| |||||||| | ||| || Sbjct 5075 TGCAAGATTGCACACGGCAATCTCGTCCTTTGAAGAGTACTCCACGATCTCCGTGCAAAG 5016 Query 148889 ATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTT 148948 || ||| || || ||||||||| | || |||||||| | ||| ||||| ||||| Sbjct 5015 GTTTGAGCACTTTATTGTGCCCACGTTTTGCTGGTTGCTCTTTCGGTTACACGCATCCTT 4956 Query 148949 GTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATG--AACCGATGCAGG 149006 ||||||||||||||| |||| ||||||||||| | ||| | |||| || | | |||| Sbjct 4955 GTACAGCATGTACGGCACGCCGGTTTCCACCTGTGATTCAATTATGGCAAACCA--CAGG 4898 Query 149007 TCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATACAGCCGC 149066 |||||||| ||||| | ||||||| |||| |||||| ||| | | Sbjct 4897 TCCTGCGCCTTTACTTGGCGAATAAAGCGACCTTCCTTCTCGTAGCCCTCGTACCGTTTC 4838 Query 149067 TCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGAC 149126 |||||| | ||||| | |||| | |||||||| | ||||||||||| || | Sbjct 4837 TCGAACTCTTCGCCCCACGAATCAGACAATCCGGGGCAATCATGCGGGCACATAAGACTC 4778 Query 149127 CACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATG 149186 |||| ||| || | ||| |||||||| || | ||| || | ||| || || || | Sbjct 4777 CACATTTCGTTAGCCTCCACTCGCTTCATGAATAAATCCGGTATCCAAAGGGCATAGAAC 4718 Query 149187 AGGTCGCGCGC-CTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAA 149245 | ||| ||||| | | | || || || |||| ||| | ||| | ||| Sbjct 4717 ATGTCTCGCGCACGTAC-CTCCTCCTTCCCTGTGTTCTTTTTCAGATCGAGAAACTCGAA 4659 Query 149246 TATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC---TTGCCGCC 149302 | || ||||||||||||| | ||| | || | || || ||| ||||| || Sbjct 4658 CACATCACCGTGCCACGGCTCCAGGTAGATTGCAAATGCTCCGGGTCGCTTATTGCCTCC 4599 Query 149303 CTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTGGC 149362 || ||||||| ||| || |||| || |||| |||| ||| || | | ||| ||| Sbjct 4598 TTGATCGACGTACCGCGCCGTGTTATTGTACACGCGAAGCATCGGCACCAAACCATTGGA 4539 Query 149363 AGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCC 149422 | || || || ||| | || ||| || | |||||||| | || Sbjct 4538 GATTCCATTTGTGCCCGCGATGTACGTTCCCTTCGCACGGATACAATGCACGTTCAGCCC 4479 Query 149423 GATGCCGCCGCCGTACTTTGAGAT--GGCCGCGCAGTCGCCGAGCGTCGAGTAGATGCCC 149480 ||||| ||| | ||||||| || || ||| | || | ||||| |||||| || Sbjct 4478 AATGCCACCGGCTGACTTTGATATCAGGGCGCACTGTTTC--AGCGTATCGTAGATACCG 4421 Query 149481 TCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGTG 149540 || ||||||||| ||| |||| ||| ||||| || | | |||||| | || Sbjct 4420 TCAATGCTGTCGTCGGACATCGTCAACAGGAAGCAGGAAGAAAGCTGCGGACGTTGTGTC 4361 Query 149541 CCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGTAC 149600 | || || ||||| || || || || || ||| || || || || | |||| Sbjct 4360 GCCGCAGCAAACATAGTTGGAGAAGCATGGGTGAAAAATCGCTCCGACAGCAGATTGTAC 4301 Query 149601 GACTCGA-GCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCAT 149659 | ||||| | ||| || || || ||||| || || || ||||| |||||||||||||| Sbjct 4300 GTCTCGATGGCCGC-ATCGATATCCTCGCCGTGAATACCGATGGCAACGCGCATCAGCAT 4242 Query 149660 ATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTCTAGTGT 149719 |||||| || || || | | ||| ||||||||||| |||| || | || Sbjct 4241 ATGCTGGGGACGTTCGACGATCTTGCCCTTAATTTTGAGCAGGTAGGATCGCTCCAAAGT 4182 Query 149720 CTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCG 149752 || |||| || || || ||| |||||||||| Sbjct 4181 TTTAAAGCCGAAATAATTATAGCCAAAGTCGCG 4149 >seq38620 Length=1898 Score = 127 bits (140), Expect = 2e-24 Identities = 177/248 (71%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 120640 AGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTC 120699 || || |||||||| |||||| || ||||||||||| ||||||||||| ||||| Sbjct 35 AGACAGGCAAAGTCGCAGTGCAGTCCTTCGTCGCGCGAGATCAGCTCGTTCGAGAACGTG 94 Query 120700 AGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAG 120759 || || ||||| | ||| | |||| | |||| ||||| ||||| || || || Sbjct 95 AGTCCTGGCATCAAGCCGCGCTTCTTAAGCCAGAAAATGGCCGCAAAACTACCGCTGAAA 154 Query 120760 AACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTG 120819 || | ||||||||| || ||||| || | || || | || | ||| ||||||| Sbjct 155 AAGATACCCTCCACGGCAGCGAAGGCAACAACCCGTTCACCAAAGTTGGCCTTCTTGCTT 214 Query 120820 TCGATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCG 120879 |||||| |||| ||||| |||||||| || ||||||||| | | ||||| |||| Sbjct 215 GAGATCCAGTTCAGAGCCCAATCGGCCTTCTTTTTCACGCACGGTAGCGTCTCGATCGCG 274 Query 120880 TTCAGCAG 120887 || | ||| Sbjct 275 TTAAACAG 282 >seq50967 Length=297 Score = 125 bits (138), Expect = 7e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | || || |||||||| || |||||||| || ||| ||| | || || || Sbjct 101 AAATGCAGAGTCGATTCTTTCTGGATGTTGTAATCCGACAAGGTGCGACCA-TCTTCCAG 159 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || ||| | || || ||||| || || || ||||| ||||| || || || Sbjct 160 CTGCTTTCCGGCGAAGATAAGACGCTGTTGATCTGGCGGGATTCCTTCTTTATCCTGAAT 219 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 |||| ||||| | ||| | ||| |||| |||||||| |||| |||| |||||||| Sbjct 220 CTTTGCCTTGACGTTCTCGATCGTATCGGATGGCTCCACCTCGAGAGTGATCGTTTTGCC 279 Query 133634 GGTCAGAGTTTTTACGAA 133651 |||||||||||| ||||| Sbjct 280 GGTCAGAGTTTTGACGAA 297 >seq20890 Length=2679 Score = 120 bits (132), Expect = 3e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||| ||||| ||||| || |||||||| || |||| |||||| ||||| Sbjct 1433 ATGAAGGGTCGACTCCTTCTGAATGTTGTAATCAGACAGCGTGCGTCCGTCCTCCAGCTG 1492 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 |||||| ||| |||| || |||||||| || || ||||| || |||||||| |||||| Sbjct 1493 CTTGCCGGCGAAAATCAGACGCTGCTGATCTGGGGGGATACCCTCCTTGTCCTGGATCTT 1552 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 || | | ||| | ||| || | ||| || || || | ||| | ||| || || || Sbjct 1553 GGCTTTCACATTCTCGATCGTATCCGAGGGTTCAACCTCAAGGGTAATGGTCTTACCCGT 1612 Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| ||||| |||||||| Sbjct 1613 GAGGGTTTTCACGAAGATCTGCAT 1636 >seq42053 Length=1259 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | ||| ||||| ||||| || ||||| ||| || ||| |||||| ||| Sbjct 1214 AAGTGCAAGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCAAGC 1155 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| ||| | || | |||||||| || || || |||||||||||||| |||| Sbjct 1154 TGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATC 1095 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || || | | ||| | || || | ||||| || || | |||| ||| ||||| Sbjct 1094 TTAGCTTTCACATTCTCGATAGTATCCGAAGGCTCGACCTCCAGAGTGATGGTCTTGCCA 1035 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 |||||||| || ||||| |||||||| Sbjct 1034 GTCAGAGTCTTCACGAAGATCTGCAT 1009 >seq20012 Length=3655 Score = 104 bits (114), Expect = 2e-17 Identities = 144/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| || || ||||| ||||| || || || ||| ||| | ||||| ||||| |||| Sbjct 2515 GGTAGATTCCTTCTGAATATTATAGTCAGACAACGTACGACCA-TCCTCCAGCTGTTTGC 2573 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || |||||||| || || || || ||||| || || ||||||| || Sbjct 2574 CGGCGAAGATCAGACGCTGCTGATCTGGTGGAATACCTTCTTTATCCTGGATCTTTGCCT 2633 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | ||||| | |||||| || |||| || | ||| || || || || | Sbjct 2634 TCACATTTTCGATGGTGTCAGAGGGCTCGACCTCGAGAGTTATGGTCTTCCCAGTGAGCG 2693 Query 133642 TTTTTACGAAAATCTGCAT 133660 |||| |||||||||||||| Sbjct 2694 TTTTGACGAAAATCTGCAT 2712 >seq41025 Length=2165 Score = 89.7 bits (98), Expect = 5e-13 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 133530 ATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGC 133589 || || ||||| || || || ||||| |||||||| || |||||| ||||| | | Sbjct 5 ATAAGACGCTGTTGATCTGGTGGGATTCCTTCCTTATCCTGAATCTTTGCCTTGACGTTC 64 Query 133590 TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACG 133649 || | ||| |||| || ||||| |||| |||| || || |||||||||||||| ||| Sbjct 65 TCGATCGTATCGGATGGTTCCACCTCGAGAGTGATCGTCTTTCCGGTCAGAGTTTTGACG 124 Query 133650 AAAATCTGCATG 133661 || || |||||| Sbjct 125 AAGATTTGCATG 136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483112329187520