Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1636 242 4e-59 seq50967 131 2e-25 seq20012 109 5e-19 seq3519 107 2e-18 seq42053 104 2e-17 seq38620 104 2e-17 seq41025 84.2 2e-11 >seq1636 Length=7642 Score = 242 bits (268), Expect = 4e-59 Identities = 1128/1763 (64%), Gaps = 42/1763 (2%) Strand=Plus/Minus Query 146573 CCGCAGGTTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCACATCG-CCACGAGTGA 146631 |||| || || || ||||| || |||||||||||||| ||||| |||| ||| || Sbjct 5967 CCGCCGGCTTGGTACGCAAGTAGTACATGCCCGTTTTAAGGCC-CATCTTCCAGCCGTAG 5909 Query 146632 TTGTGAATCGAAGTCATGATGGCGTACGTCGGCTCCGCCACGAAAAGATTAAACGATTGG 146691 || ||||| |||| || | || |||| || |||||| || || ||||| || Sbjct 5908 AAATGGATCGATGTCAGCTTGCCATAATTCGGTTCAGCCACGTGAATGTTGAACGACTGT 5849 Query 146692 CTTTGATCTATGAAAGCGTTGCGGTCGGCCGCCATCTCAATCATGC--GTTTTGTCTTC- 146748 ||||||||| || || |||||||| ||||||| | ||| ||||| || Sbjct 5848 GATTGATCTATAAACGCTCCTCGGTCGGCGGCCATCT---TGATGGAAGTTTTTACTGAT 5792 Query 146749 ATTTCCCAAGCGGTTTTGTACA-GCCCCTTAACGCTATCTGGAATACCTTCAATGTTTTG 146807 || ||||| | |||||||| | | | | | | || | ||||| | ||| || || Sbjct 5791 ATCTCCCAGACCGTTTTGTAAATGTCACGAATCTCT-TGGGGAATTTCCGTAATTTTCTG 5733 Query 146808 AATAGAGCCCTTGTGCGCAAAAATA--GTGTTTCGTATT-TCGGGCGTGTAAAGGTTTAG 146864 || || || |||||||| | ||| |||| || ||| ||| | ||| | Sbjct 5732 GATCGATCCGTTGTGCGCCAGAATTCGGTGTCTCATATCATCGTCCCAC--AAGCCACAC 5675 Query 146865 TTTAATGAGGTCATCAATTAAATACTGATTGACCACTTGAAACTCGCCCGCCAGCACACG 146924 | | | ||| | | | || ||||| ||||||||||| || |||| ||| || || Sbjct 5674 TCCG-TCAAGTCCTTCAGGAGATGGTGATTCACCACTTGAAATTCTCCCGACAGGACGCG 5616 Query 146925 TCTGAGATACACATTGCTAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGGGC 146984 || ||| || || ||| | || || || |||||||| ||||| || ||||| || Sbjct 5615 CCTATTATAAACGTTCGATGTGTACGGTTCGAAGGACTCATTGTTGCCCAAAATTTGTGC 5556 Query 146985 CGTGGTTGCGGTAGGCATGTACGCCACCAACAATGAATTTCGCAGACCGTACGCACGG-- 147042 || | || || ||||| |||| || | ||||| || | || | || || Sbjct 5555 GGTTGAAGCCGTCGGCATCGGTGCCAACAGTAGAGAATTGCGAATGCCAT--GCTTGGCA 5498 Query 147043 ATGTTGTCCTTCAAAGTTTGCCAGTCCCACATCGACGAGGGCGTCACGTTCCACATGTCG 147102 || || || ||||| ||||| ||||| || || ||| ||||||||| ||| Sbjct 5497 ATCTTCTCTTTCAATTCCGCCCAGTTCCACAGGTCCGTAGGTGTCTTGTTCCACATATCG 5438 Query 147103 TACTGGAGCACTCCTCGACTGGCGGGACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGC 147162 ||||| | | || || | || || || || |||| ||| |||||| || Sbjct 5437 TACTGCAAGATACCCTTGCTTACCGGGCTACCTTCGTACGTCTCGTATGGTCCGTCACGG 5378 Query 147163 TGCGCCAATTCACAGCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTG 147222 ||||| || ||||| ||||| | || || ||||| || ||||| ||||| | Sbjct 5377 GCAGCCAACTCGCAGCTAGCCTCCAAGGCACCGTAGTAGATTGTTTCAAACATTTGCTGA 5318 Query 147223 TTTAGGACGGTCGCTTCTTCGCTCTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCC 147282 || || || || || |||||||| || |||| || | ||| ||||||||| Sbjct 5317 TTGAGTTTTTGGGCCTCCTCACTCTCGTATGGGTATCGCATCAGGATAAACGCATCGGCC 5258 Query 147283 AAACCCTGGATACCGACGCCGATAGGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCT 147342 | ||| || | ||| | ||||| || | || ||| || ||| || Sbjct 5257 ATACCTTGCACACCAATACCGATGGGCCTGTGGCGCATGTTCGAACGACGCGCCTCCGGA 5198 Query 147343 ATGGGATAGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATT 147402 | ||||||| |||| || || || ||||| | ||| ||| ||| |||| | Sbjct 5197 ACCGGATAGTAGTTGATGTCGATGATTTTGTTCAAGTTTCGCGTTACGGTCTTAGCGACA 5138 Query 147403 GTTTTGAGTTTCTCGAAATCATAAGTCCCGTCTTCGA-CACGTACGCATTGGTTCACGGC 147461 ||| ||||| | ||||| || || | || ||| | | | ||| ||| | || Sbjct 5137 TCTTTCAGTTTGCCAAAATCGTACGTACGATC--CGATCTCACAAACAT--GTTTAACGC 5082 Query 147462 GATAGACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTG--TACTGCACGATTTCG 147519 ||| || || |||||||| ||||| |||| || | | | | |||| |||||| || Sbjct 5081 GATCGATGCAAGATTGCACACGGCAATCTCGTC--CTTTGAAGAGTACTCCACGATCTCC 5024 Query 147520 GCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCAC 147579 | ||| ||||| ||| ||||| |||| |||||||| ||||| || || || ||| Sbjct 5023 GTGCAAAGGTTTGAGCACTTTATTGTGCCCACGTTTTGCTGGTTGCTCTTTCGGTTACAC 4964 Query 147580 GCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAAC 147636 || || ||| | ||||||||||| ||||||| || || || | ||||| || |||| Sbjct 4963 GCATCCTTGTACAGCATGTACGGCACGCCGGTTTCCACCTGTGATTCAATTATGGCAAAC 4904 Query 147637 CTATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCG 147696 | |||||||||||| || | | | |||| || || || ||||| | |||| Sbjct 4903 C---ACAGGTCCTGCGCCTTTACTTGGCGAATAAAGCGACCTTCCTTCTCGTAGCCCTCG 4847 Query 147697 TACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACAC 147756 ||| ||| ||||| ||||| | |||| | | ||||| || | |||||| ||| Sbjct 4846 TACCGTTTCTCGAACTCTTCGCCCCACGAATCAGACAATCCGGGGCAATCATGCGGGCAC 4787 Query 147757 ATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGC 147816 || || |||||| |||| || | || || ||| || | |||||| | ||| || Sbjct 4786 ATAAGACTCCACATTTCGTTAGCCTCCACTCGCTTCATGAATAAATCCGGTATCCAAAGG 4727 Query 147817 GCGTACATAAGATCGCGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATTAAG- 147875 || || | | || ||||| ||||| || |||| ||||| || || Sbjct 4726 GCATAGAACATGTCTCGCGCACGTACCTCCTCCTTCCCTGTGTTCTTTTTCAGATCGAGA 4667 Query 147876 CACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGC-- 147933 || | | | | || ||||||| || || | ||||| || | || || ||| Sbjct 4666 AACTCGA-ACACATCACCGTGCCACGGCTCCAGGTAGATTGCAAATGCTCCGGGTCGCTT 4608 Query 147934 -TTTCCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAG 147992 || || || || ||||| | ||| || |||| || ||||||| | ||| || ||| Sbjct 4607 ATTGCCTCCTTGATCGACGTACCGCGCCGTGTTATTGTACACGCGAAGCATCGGCACCAA 4548 Query 147993 GCCGCTCGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCAC 148052 || | | | || || ||| ||| | | || || || | ||||| Sbjct 4547 ACCATTGGAGATTCCATTTGTGCCCGCGATGTACGTTCCCTTCGCACGGATACAATGCAC 4488 Query 148053 GTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTA 148112 ||| | |||||||| ||| | |||||||||| ||||| | || || ||| Sbjct 4487 GTTCAGCCCAATGCCACCGGCTGACTTTGATATCAGGGCGCACTGTTTCAGCGTATCGTA 4428 Query 148113 GATGCCGTCGATGCTGTCGTTTTTGA-CGCCAAGCAAAAAACACGAACACATTTGCGGAA 148171 ||| ||||| |||||||||| | || ||| || || || ||| | | |||||| Sbjct 4427 GATACCGTCAATGCTGTCGTCGGACATCGTCAA-CAGGAAGCAGGAAGAAAGCTGCGGAC 4369 Query 148172 TCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCA 148231 | || |||| | || | || ||| || || || || ||| | || || Sbjct 4368 GTTGTGTCGCCGCAGCAAACATAGTTGGAGAAGCATGGGTGAAAAATCGCTCCGACAGCA 4309 Query 148232 TGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCA 148291 |||||||| || || | ||||| || ||||||||||| || | || ||||||| Sbjct 4308 GATTGTACGTCTCGATGGCCGCATCGATATCCTCGCCGTGAATACCGATGGCAACGCGCA 4249 Query 148292 TGAGCATGTGCTGTGGTCGTTCG 148314 | ||||| ||||| || |||||| Sbjct 4248 TCAGCATATGCTGGGGACGTTCG 4226 >seq50967 Length=297 Score = 131 bits (144), Expect = 2e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962 |||| ||||| |||||||| | | || ||||| || |||||||| || || ||| Sbjct 86 CGCAGACGCAACACCAAATGCAGAGTCGATTCTTTCTGGATGTTGTAATCCGACAAGGTG 145 Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022 || |||||| ||||| || |||| |||| ||||||||||||||||| || || ||| Sbjct 146 CGACCATCTTCCAGCTGCTTTCCGGCGAAGATAAGACGCTGTTGATCTGGCGGGATTCCT 205 Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082 |||||||| ||| ||| || | | || | ||||||| |||||||| |||| Sbjct 206 TCTTTATCCTGAATCTTTGCCTTGACGTTCTCGATCGTATCGGATGGCTCCACCTCGAGA 265 Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAA 132114 || | |||||| || ||||||||||| | ||| Sbjct 266 GTGATCGTTTTGCCGGTCAGAGTTTTGACGAA 297 >seq20012 Length=3655 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| |||| || | | | || || || ||||| || ||||| || ||||| | Sbjct 2498 CGCAACACCAGGTGAAGGGTAGATTCCTTCTGAATATTATAGTCAGACAACGTACGACCA 2557 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || || |||||||| |||| |||| |||||||| |||||||| || || ||||||||| Sbjct 2558 TCCTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGATCTGGTGGAATACCTTCTTTA 2617 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || ||| |||| | ||| | || || | ||||| || |||| || | Sbjct 2618 TCCTGGATCTTTGCCTTCACATTTTCGATGGTGTCAGAGGGCTCGACCTCGAGAGTTATG 2677 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || ||||| || ||||| | |||||||||||| Sbjct 2678 GTCTTCCCAGTGAGCGTTTTGACGAAAATCTGCAT 2712 >seq3519 Length=1813 Score = 107 bits (118), Expect = 2e-18 Identities = 137/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962 ||||| ||||| |||||||| | | || ||||| || |||||||| || || ||| Sbjct 1625 CGCAAACGCAACACCAAATGCAGAGTCGATTCTTTCTGGATGTTGTAATCCGACAAGGTG 1684 Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022 || |||||| ||||| || |||| |||| ||||||||||||||||| || || ||| Sbjct 1685 CGACCATCTTCCAGCTGCTTTCCGGCGAAGATAAGACGCTGTTGATCTGGCGGGATTCCT 1744 Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082 || ||||| ||| ||| || | | || | ||||||| |||||||| |||| Sbjct 1745 TCCTTATCCTGAATCTTTGCCTTGACGTTCTCGATCGTATCGGATGGCTCCACCTCGAGA 1804 Query 132083 GTCAGCGTT 132091 || | |||| Sbjct 1805 GTGATCGTT 1813 >seq42053 Length=1259 Score = 104 bits (114), Expect = 2e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| || | ||||| || | | | ||||| || ||||||||||||||| || ||| Sbjct 1230 ACGCAGACGAAGGACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGGGT 1171 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || || || ||||| || || | |||| | |||||| |||||||| || ||||| Sbjct 1170 GCGTCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCC 1111 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 ||| || || || || ||||| | || | |||||| | ||||| || || | Sbjct 1110 TTCCTTGTCCTGGATCTTAGCTTTCACATTCTCGATAGTATCCGAAGGCTCGACCTCCAG 1051 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | || || ||||||||||| || | ||| |||||||| Sbjct 1050 AGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 1009 >seq38620 Length=1898 Score = 104 bits (114), Expect = 2e-17 Identities = 171/244 (70%), Gaps = 2/244 (1%) Strand=Plus/Minus Query 46743 AATGCGTTCGAGCACG-TGCCATGCGTTCGCAAAAAGGCCCAGTGGGCCATGAAGTGGAT 46801 || ||| ||||| ||| | || ||||| || |||||| | ||||| |||| ||||| Sbjct 276 AACGCGATCGAG-ACGCTACCGTGCGTGAAAAAGAAGGCCGATTGGGCTCTGAACTGGAT 218 Query 46802 CGAGAGCGAGACCGCCACGCTGGCCGAGCGCATGGTGGCATTCGCGATAGTCGAAGGCGT 46861 | ||| ||| |||| | | || || | || || ||||| || || || | Sbjct 217 CTCAAGCAAGAAGGCCAACTTTGGTGAACGGGTTGTTGCCTTCGCTGCCGTGGAGGGTAT 158 Query 46862 GtttttttCGGGCAGTTTTGCCGCCATTTTTTACATTAAAACCAAAGGCATAATGCCGGG 46921 ||||| || |||||||| |||||||| | |||| | ||| | ||||| || Sbjct 157 CTTTTTCAGCGGTAGTTTTGCGGCCATTTTCTGGCTTAAGAAGCGCGGCTTGATGCCAGG 98 Query 46922 CCTGACGTTCAGTAACGAGTTGATCTCGCGCGACGAAGGACTACACACGGACTTTGCGTG 46981 || |||||| |||||| |||||||||||||||||||||| ||| |||||||| || Sbjct 97 ACTCACGTTCTCGAACGAGCTGATCTCGCGCGACGAAGGACTGCACTGCGACTTTGCCTG 38 Query 46982 TCTC 46985 |||| Sbjct 37 TCTC 34 >seq41025 Length=2165 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 131991 AGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACT 132050 |||| ||||||||||||||||| || || ||||| ||||| ||| ||| || | | Sbjct 3 AGATAAGACGCTGTTGATCTGGTGGGATTCCTTCCTTATCCTGAATCTTTGCCTTGACGT 62 Query 132051 GTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 132110 || | ||||||| || ||||| |||| || | ||| || || ||||||||||| | Sbjct 63 TCTCGATCGTATCGGATGGTTCCACCTCGAGAGTGATCGTCTTTCCGGTCAGAGTTTTGA 122 Query 132111 TGAAAATCTGCATG 132124 ||| || |||||| Sbjct 123 CGAAGATTTGCATG 136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476307074393280