Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20nili_20[genbank_20GCA_5F000439205.1_202013-07-22] 51,048 sequences; 98,320,046 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1636 230 2e-55 seq20012 141 9e-29 seq42053 113 5e-20 seq20890 113 5e-20 seq38620 100 3e-16 >seq1636 Length=7642 Score = 230 bits (254), Expect = 2e-55 Identities = 1137/1786 (64%), Gaps = 32/1786 (2%) Strand=Plus/Plus Query 7524 CTACTTGTTGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGT 7583 |||| || | ||||| || ||| | || ||||| || || |||||| ||||||| Sbjct 4196 CTACCTGCTCAAAATTAAGGGCAAGATCGTCGAACGTCCCCAGCATATGCTGATGCGCGT 4255 Query 7584 GGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTC 7643 || | || ||||||||||| || || || || ||| | || |||||| | || |||| Sbjct 4256 TGCCATCGGTATTCACGGCGAGGATATCGATGCGGCCATCGAGACGTACAATCTGCTGTC 4315 Query 7644 TTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACA-AACGCGCCTC 7702 | | || || || ||||| || || |||||||| |||| ||| |||| || | Sbjct 4316 GGAGCGATTTTTCACCCATGCTTCTCCAACTATGTTTGCTGCGGCGACACAACG-TCCGC 4374 Query 7703 AATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACA 7762 | | || || || || || | || ||| ||| |||||||| ||||| || ||| | | Sbjct 4375 AGCTTTCTTCCTGCTTCCTGTTGACGATGTCCGACGACAGCATTGACGGTATCTACGATA 4434 Query 7763 CGCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACG 7822 ||||| | |||||| || || || | | ||| || || || |||||||| | Sbjct 4435 CGCTGAAACAGTGCGCCCTGATATCAAAGTCAGCCGGTGGCATTGGGCTGAACGTGCATT 4494 Query 7823 ACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGC 7882 | || || || || | ||||| | ||| || |||| ||| ||||| | || Sbjct 4495 GTATCCGTGCGAAGGGAACGTACATCGCGGGCACAAATGGAATCTCCAATGGTTTGGTGC 4554 Query 7883 CCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGG---AAAGCGCA 7939 | ||| | ||||||| ||||||| ||| ||| | || || || || || ||||| Sbjct 4555 CGATGCTTCGCGTGTACAATAACACGGCGCGGTACGTCGATCAAGGAGGCAATAAGCGAC 4614 Query 7940 AAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGACATTTACGCAGTGCTAAATC 7999 || || ||| ||||| ||||||||||||||| || | | || | || ||| Sbjct 4615 CCGGAGCATTTGCAATCTACCTGGAGCCGTGGCACGGTGATGTGTTCGAGTTTCTCGATC 4674 Query 8000 TGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGCGCGATCTATTCTTCGGATTGTGGG 8059 || |||| || || || ||||| || | |||| | | ||| Sbjct 4675 TGAAAAAGAACACAGGGAAGGAGGAGGTACGTGCGCGAGACATGTTCTATGCCCTTTGGA 4734 Query 8060 TGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCACAATGGTCGCTCATGTGCCCCG 8119 | || ||| | || |||| ||| || | ||| | ||| || |||||||| Sbjct 4735 TACCGGATTTATTCATGAAGCGAGTGGAGGCTAACGAAATGTGGAGTCTTATGTGCCCGC 4794 Query 8120 ATCGTTGCCCTTTATTAAAAAACGTTTACGGTTCAAAATTTGAACAATTGTACAAACAAT 8179 || |||||| ||| | | || | | || || || |||| | | Sbjct 4795 ATGATTGCCCCGGATTGTCTGATTCGTGGGGCGAAGAGTTCGAGAAACGGTACGAGGGCT 4854 Query 8180 ACGAACACGACGG-CGCGTACGTGCGGCAAGTGAAAGCGCGCGACCTGCACCGCGCCATT 8238 |||| | || || ||| | | || ||||| || |||| |||||| ||||| Sbjct 4855 ACGAGAAGGAAGGTCGC-TTTATTCGCCAAGTAAAGGCGCAGGACCTGTGGTTTGCCATA 4913 Query 8239 ATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGCAACGCC 8298 || |||| || |||||||| ||||||||||||||||||| || || || ||| Sbjct 4914 ATTGAATCACAGGTGGAAACCGGCGTGCCGTACATGCTGTACAAGGATGCGTGTAACCGA 4973 Query 8299 AAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAAATTGTA 8358 || ||||| || ||||||||||| || ||| || || ||| | || || || Sbjct 4974 AAGAGCAACCAGCAAAACGTGGGCACAATAAAGTGCTCAAACCTTTGCACGGAGATCGTG 5033 Query 8359 CAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTCGGTGTGTTTAAACGCG 8418 ||||| | ||||| | ||||| |||||||| || ||| | |||||| | Sbjct 5034 GAGTACTCTTCAAAGGACGAGATTGCCGTGTGCAATCTTGCATCGATCGCGTTAAACATG 5093 Query 8419 TTCGT-TGATCGACGCTCAAACACTTACGACTTTGAACAATTGAAAAACGCCGTGCAAGT 8477 || || ||||| | || || ||||| |||| || ||||| | | | || | Sbjct 5094 TTTGTGAGATCG--GATC--GTACGTACGATTTTGGCAAACTGAAAGATGTC--GCTA-A 5146 Query 8478 GACGGTA---CGCAATTTAGATCGCATCATTGATGTCAATTTTTATCCCTTGGAAGAAGC 8534 ||| ||| || || || | ||||| || |||| | ||||| | || || Sbjct 5147 GACCGTAACGCGAAACTTGAACAAAATCATCGACATCAACTACTATCCGGTTCCGGAGGC 5206 Query 8535 GCG-CGTATCGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCGACG 8593 ||| ||| ||||||||||||||||| ||| | || | || ||||||||| ||||||| | Sbjct 5207 GCGTCGT-TCGAACATGCGCCACAGGCCCATCGGTATTGGTGTGCAAGGTATGGCCGATG 5265 Query 8594 CGTTTGCCATGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCAACATAAAAA 8653 ||||| | || |||| ||| ||||| || | || || | | ||||| ||| Sbjct 5266 CGTTTATCCTGATGCGATACCCATACGAGAGTGAGGAGGCCCAAAAACTCAATCAGCAAA 5325 Query 8654 TAGCGGAAACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACT---TGCCCGAGAAT 8710 | ||||| | || ||||| || || || || ||||| | | |||||| || Sbjct 5326 TGTTTGAAACAATCTACTACGGTGCCTTGGAGGCTAGCTGCGAGTTGGCTGCCCGTGA-- 5383 Query 8711 TGGGCACGTACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACGACA 8770 || | ||||| |||||| || ||||| | ||| || || ||||| ||||| | Sbjct 5384 -CGGACCATACGAGACGTACGAAGGTAGCCCGGTAAGCAAGGGTATCTTGCAGTACGATA 5442 Query 8771 TGTGGAATGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAAATTGCTC 8830 ||||||| || || || ||||||| ||| || |||||| || ||||| Sbjct 5443 TGTGGAACAAGACACCTACGGACCTGTGGAACTGGGCGGAATTGAAAGAGAAGATTGCCA 5502 Query 8831 AATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAAA 8890 | || | |||||||| || || |||| ||||| || || | || || |||| Sbjct 5503 AGCATGGCATTCGCAATTCTCTACTGTTGGCACCGATGCCGACGGCTTCAACCGCACAAA 5562 Query 8891 TAATGGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTACGTGAGACGAGTGT 8950 | |||| ||||| || ||||| || |||| ||| ||||| || || || || Sbjct 5563 TTTTGGGCAACAATGAGTCCTTCGAACCGTACACATCGAACGTTTATAATAGGCGCGTCC 5622 Query 8951 TGGCCGGCGATTTTTTAATGCTGAATCGTCATTTGATGCGCGACTTGATCGAAGCG-GGC 9009 || | || || ||| | || |||||| ||| | || ||||||| || || | ||| Sbjct 5623 TGTCGGGAGAATTTCAAGTGGTGAATCACCATCTCCTGAAGGACTTGA-CGGAGTGTGGC 5681 Query 9010 GTTTACGACGACAAAATGCGCGATGCCATCGTGGAAGCCAACGGCAGCG-TTCAGAACAT 9068 | | ||||| | ||| | | || ||| |||||| | || | ||||| || Sbjct 5682 TTGTGGGACGATGATATGAGACACCGAATTCTGGCGCACAACGG-ATCGATCCAGAAAAT 5740 Query 9069 TGACGCGGTGCCTCAACACATTAAAGAGCTGTATAAAACCGTTTGGGAAAT-GAAGCAAA 9127 | | | || ||| | ||| || | || ||||| || ||||| || || ||| Sbjct 5741 TACGGAAATTCCCCAAGAGATTCGTGACATTTACAAAACGGTCTGGGAGATATCAGTAAA 5800 Query 9128 GCACGCTGATCGGCATGGCTGCGGATAGAGGCGCTTTTATTGATCAGAGTCAATCTTTTA 9187 || ||| ||||| || || |||| || ||||| ||||| || || || | Sbjct 5801 -AACTTCCATCAAGATGGCCGCCGACCGAGGAGCGTTTATAGATCAATCACAGTCGTTCA 5859 Query 9188 ACGTGTTCGTAGCCGCACCAACTTACGCTTTGATGTCCAGCATTCATTATTTAACTTGGA 9247 || | ||| || | ||| | ||| | | || | || |||| | |||| Sbjct 5860 ACATTCACGTGGCTGAACCGAATTATGGCAAGCTGACATCGATCCATTTCTACGGCTGGA 5919 Query 9248 AAATGGGTTTAAAAACAGGCATGTACTATTTGCGCACAAAACCCGC 9293 | ||||| | ||||| ||||||||||| ||||| || || || || Sbjct 5920 AGATGGGCCTTAAAACGGGCATGTACTACTTGCGTACCAAGCCGGC 5965 >seq20012 Length=3655 Score = 141 bits (156), Expect = 9e-29 Identities = 174/235 (74%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 134483 CTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC 134542 ||| || || | ||||||||||| ||||| || || |||||||| ||||| || ||||| Sbjct 2482 CTTACCACCACGAAGTCGCAACACCAGGTGAAGGGTAGATTCCTTCTGAATATTATAGTC 2541 Query 134543 -GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGG 134601 | ||||| | || || || ||||||||||| || || |||| |||||||||||| | Sbjct 2542 AGACAACG-TACGACCATCCTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGATCTG 2600 Query 134602 GCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATT 134661 | || || |||||||| || || || ||| || || || | ||||| || | | Sbjct 2601 GTGGAATACCTTCTTTATCCTGGATCTTTGCCTTCACATTTTCGATGGTGTCAGAGGGCT 2660 Query 134662 CCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 | || |||||||| ||||| || || || | ||||| |||||||| ||||| || Sbjct 2661 CGACCTCGAGAGTTATGGTCTTCCCAGTGAGCGTTTTGACGAAAATCTGCATCTT 2715 >seq42053 Length=1259 Score = 113 bits (124), Expect = 5e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCT 134576 || || ||||| ||||||||||||||| | |||| | ||| || ||||| ||||| Sbjct 1205 GTCGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCAAGCTGCTTGCCA 1146 Query 134577 GCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTG 134636 || || ||||||||||||||||| || || |||||||| || || || || || ||| Sbjct 1145 GCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTAGCTTTC 1086 Query 134637 ACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTT 134696 || || | || || || | || || || ||||| ||||| || || || | ||| Sbjct 1085 ACATTCTCGATAGTATCCGAAGGCTCGACCTCCAGAGTGATGGTCTTGCCAGTCAGAGTC 1026 Query 134697 TTAACGAAAATTTGCAT 134713 || ||||| || ||||| Sbjct 1025 TTCACGAAGATCTGCAT 1009 >seq20890 Length=2679 Score = 113 bits (124), Expect = 5e-20 Identities = 161/224 (72%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554 || || | ||| || || || || || ||||| ||||||||||| || | || | ||| | Sbjct 1419 AGGCGAAGCACCAGATGAAGGGTCGACTCCTTCTGAATGTTGTAATCAGACAGC-GTGCG 1477 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 ||| || ||||| ||||| || ||||||| |||||||||||| || || || || || Sbjct 1478 TCCGTCCTCCAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGATCTGGGGGGATACCCTC 1537 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || || || || || ||| || || | || || || | ||| || || || || Sbjct 1538 CTTGTCCTGGATCTTGGCTTTCACATTCTCGATCGTATCCGAGGGTTCAACCTCAAGGGT 1597 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGT 134718 |||||| ||||| || | ||||| ||||| || ||||| |||| Sbjct 1598 AATGGTCTTACCCGTGAGGGTTTTCACGAAGATCTGCATCTTGT 1641 >seq38620 Length=1898 Score = 100 bits (110), Expect = 3e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 21717 GAGACAAGCAAAATTGGTGTGCAATCCCTCGTCGCGCGAAATCAATTCGTTGCTGAACGT 21776 |||||| ||||| | | ||||| ||| ||||||||||| |||| ||||| |||||| Sbjct 34 GAGACAGGCAAAGTCGCAGTGCAGTCCTTCGTCGCGCGAGATCAGCTCGTTCGAGAACGT 93 Query 21777 GAGACCGGGCATTAAACCTCGATTTTTAATGTAAAAAATTGCCGCAAAGCTACCGGaaaa 21836 ||| || ||||| || || || || |||| | ||||| |||||||| |||||| || Sbjct 94 GAGTCCTGGCATCAAGCCGCGCTTCTTAAGCCAGAAAATGGCCGCAAAACTACCGCTGAA 153 Query 21837 aaaCACGCCCTCCAC 21851 ||| | |||||||| Sbjct 154 AAAGATACCCTCCAC 168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505075905280960